Vibrio gigantis: MID13_12505
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Entry
MID13_12505 CDS
T08202
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgi03016
]
MID13_12505 (truB)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MID13_12505 (truB)
Transfer RNA biogenesis [BR:
vgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MID13_12505 (truB)
Prokaryotic type
MID13_12505 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ULN63741
LinkDB
All DBs
Position
1:complement(2809620..2810573)
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYVVIAKLGERTNTSDSDGEVVETRDVNVTQEQLERCIASFKGETDQ
IPSMFSALKYQGKPLYEYARAGIEVPRESRKITVYSIELLRFEGDEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVTMLRRTGVAKYPYERMVTLEQLNEILEQAQAQEIAPKELLDPLL
MPMDTAVEDLPEVNLNAELTDLVQHGMPVQVSGAPTEGTVRMTSGEEKLFVGVAQIAEDG
RVAPKRLVVFRDEEPQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgtaaaggtcgccctatcaatggggtaattctattagataagccgacg
ggtatttcgtctaatgatgcactgcaaaaagtaaagcgtatttactttgcagagaaagca
gggcacaccggtgctctggatcctcttgcgactggcatgctgccaatttgtcttggtgaa
gcaacgaagttctctcagtttcttctagattctgataagcgctatgttgttatcgctaag
cttggtgagcgtaccaatacctctgattctgatggtgaagtggtagagacacgtgatgtt
aatgtgactcaagaacaacttgagcgttgcattgcgagcttcaagggtgaaaccgatcag
ataccatcaatgttttcagcattgaagtatcaaggtaagcctttatacgaatacgcacgt
gctggtatcgaggttcctcgtgagtctcgtaagattactgtgtactctattgaactgctt
cgttttgaaggtgatgaggttgaaatggaagtgcattgttcgaaaggcacttacatccgc
acaattaccgacgatcttggtgaaatgctaggttgtggtgctcacgtgacaatgcttcgt
cgtacaggtgtagcgaagtacccatacgagcgtatggtgactttggagcagttaaatgag
attctagagcaagcacaggcgcaagaaattgcaccgaaagagttgctggatccactgctg
atgccaatggacactgctgttgaagacttaccagaagtaaacttgaatgcggaactgact
gaccttgttcagcatggtatgccagttcaggtttctggtgcgccaactgaaggcacggtt
cgtatgacaagtggcgaagagaagctgtttgtcggcgtggctcagattgctgaagatggc
cgagttgcaccgaagcgtttagtggttttcagagatgaagagccacaagcgtaa
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integrated database retrieval system
