Vibrio gigantis: MID13_12800
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Entry
MID13_12800 CDS
T08202
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00010
Glycolysis / Gluconeogenesis
vgi00020
Citrate cycle (TCA cycle)
vgi00260
Glycine, serine and threonine metabolism
vgi00280
Valine, leucine and isoleucine degradation
vgi00310
Lysine degradation
vgi00380
Tryptophan metabolism
vgi00620
Pyruvate metabolism
vgi00630
Glyoxylate and dicarboxylate metabolism
vgi00640
Propanoate metabolism
vgi00670
One carbon pool by folate
vgi00785
Lipoic acid metabolism
vgi01100
Metabolic pathways
vgi01110
Biosynthesis of secondary metabolites
vgi01120
Microbial metabolism in diverse environments
vgi01200
Carbon metabolism
vgi01210
2-Oxocarboxylic acid metabolism
vgi01240
Biosynthesis of cofactors
Module
vgi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vgi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vgi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vgi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MID13_12800 (lpdA)
00020 Citrate cycle (TCA cycle)
MID13_12800 (lpdA)
00620 Pyruvate metabolism
MID13_12800 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
MID13_12800 (lpdA)
00640 Propanoate metabolism
MID13_12800 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MID13_12800 (lpdA)
00280 Valine, leucine and isoleucine degradation
MID13_12800 (lpdA)
00310 Lysine degradation
MID13_12800 (lpdA)
00380 Tryptophan metabolism
MID13_12800 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MID13_12800 (lpdA)
00670 One carbon pool by folate
MID13_12800 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgi04147
]
MID13_12800 (lpdA)
Enzymes [BR:
vgi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MID13_12800 (lpdA)
Exosome [BR:
vgi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MID13_12800 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_2
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
ULN63795
LinkDB
All DBs
Position
1:complement(2887615..2889045)
Genome browser
AA seq
476 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMAEHGVVFGEPQTDINKIRIWKEKVVDQLTGGLGGMAKMRNVTVVNGFGKFT
GPNSILVEGEGEATTVNFDNAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVFTKRIKNKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGALIDAEKAGIEVDERGFINVDKQ
MRTNVPHIHAIGDVVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKMIFDKETHRVIGGAVVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagttgttgtacttggttcaggtcctgctggttactca
gctgcattccgttgtgcggatttaggtctagaaacagtactagttgaacgttacagcact
cttggtggtgtatgtctaaacgttggttgtattccatcaaaagcacttcttcacgtttct
aaagtaatcgaagaagcgaaagcgatggcagagcacggcgttgtattcggcgagccacaa
acggacatcaacaagatccgtatctggaaagaaaaagtagttgatcaactaactggcggt
cttggcggtatggctaagatgcgtaacgtgactgttgttaacggtttcggtaagttcact
ggtcctaacagcattcttgttgaaggcgaaggcgaagcaacaactgttaacttcgacaac
gcaatcattgctgcgggttctcgcccaatcaaacttcctttcatcccacatgaagaccca
cgtatctgggactctacggatgcactagagctgaaagaagttcctgagaaattgcttatc
atgggcggtggtatcatcggtcttgaaatgggtacggtttaccactctctaggttctaaa
gttgaagttgttgagatgttcgaccaagttatcccagcggcggataaagacatcgttaaa
gtcttcactaagcgtattaagaataagttcaagctaatgcttgaaactaaagtaacggct
gttgaagcaaaagaagatggtatctacgtttcaatggaaggcaagaaagcgccagctgaa
gctgagcgttacgatgctgttcttgttgctatcggccgtgttccaaacggtgcacttatc
gacgctgaaaaagcaggtatcgaagttgatgagcgtggcttcatcaatgttgataagcaa
atgcgtacaaacgttcctcacatccacgcgatcggtgacgttgttggtcaaccaatgctt
gctcacaaaggtgtgcatgaaggtcacgtagctgctgaagttatctctggtaagaagcac
tacttcgaccctaaagtaatcccatcaattgcgtacactgagccagaagttgcttgggta
ggtaagactgagaaagaagcgaaagctgaaggcatcaactacgaagttgctactttccct
tgggctgcttctggtcgtgcaatcgcttctgactgtgcagatggtatgactaagatgatc
ttcgataaagagactcatcgcgtaatcggtggtgctgttgttggtactaacggtggtgaa
cttcttggtgaaatcggcctagcaatcgaaatgggttgtgacgcagaagatatcgctctt
actatccacgctcacccaactctacacgagtctgttggtctagctgcggaagtattcgaa
ggttcaatcactgaccttccaaacaagaaagctgtgaaaaagaagaagtaa
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