KEGG   Vibrio gigantis: MID13_12800
Entry
MID13_12800       CDS       T08202                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vgi  Vibrio gigantis
Pathway
vgi00010  Glycolysis / Gluconeogenesis
vgi00020  Citrate cycle (TCA cycle)
vgi00260  Glycine, serine and threonine metabolism
vgi00280  Valine, leucine and isoleucine degradation
vgi00310  Lysine degradation
vgi00380  Tryptophan metabolism
vgi00620  Pyruvate metabolism
vgi00630  Glyoxylate and dicarboxylate metabolism
vgi00640  Propanoate metabolism
vgi00670  One carbon pool by folate
vgi00785  Lipoic acid metabolism
vgi01100  Metabolic pathways
vgi01110  Biosynthesis of secondary metabolites
vgi01120  Microbial metabolism in diverse environments
vgi01200  Carbon metabolism
vgi01210  2-Oxocarboxylic acid metabolism
vgi01240  Biosynthesis of cofactors
Module
vgi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vgi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vgi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vgi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MID13_12800 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MID13_12800 (lpdA)
   00620 Pyruvate metabolism
    MID13_12800 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MID13_12800 (lpdA)
   00640 Propanoate metabolism
    MID13_12800 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MID13_12800 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MID13_12800 (lpdA)
   00310 Lysine degradation
    MID13_12800 (lpdA)
   00380 Tryptophan metabolism
    MID13_12800 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MID13_12800 (lpdA)
   00670 One carbon pool by folate
    MID13_12800 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vgi04147]
    MID13_12800 (lpdA)
Enzymes [BR:vgi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MID13_12800 (lpdA)
Exosome [BR:vgi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MID13_12800 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA HI0933_like FAD_binding_2 NAD_binding_8 AlaDh_PNT_C FAD_binding_3 Thi4 DAO
Other DBs
NCBI-ProteinID: ULN63795
LinkDB
Position
1:complement(2887615..2889045)
AA seq 476 aa
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMAEHGVVFGEPQTDINKIRIWKEKVVDQLTGGLGGMAKMRNVTVVNGFGKFT
GPNSILVEGEGEATTVNFDNAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVFTKRIKNKFKLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGALIDAEKAGIEVDERGFINVDKQ
MRTNVPHIHAIGDVVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKMIFDKETHRVIGGAVVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaagttgttgtacttggttcaggtcctgctggttactca
gctgcattccgttgtgcggatttaggtctagaaacagtactagttgaacgttacagcact
cttggtggtgtatgtctaaacgttggttgtattccatcaaaagcacttcttcacgtttct
aaagtaatcgaagaagcgaaagcgatggcagagcacggcgttgtattcggcgagccacaa
acggacatcaacaagatccgtatctggaaagaaaaagtagttgatcaactaactggcggt
cttggcggtatggctaagatgcgtaacgtgactgttgttaacggtttcggtaagttcact
ggtcctaacagcattcttgttgaaggcgaaggcgaagcaacaactgttaacttcgacaac
gcaatcattgctgcgggttctcgcccaatcaaacttcctttcatcccacatgaagaccca
cgtatctgggactctacggatgcactagagctgaaagaagttcctgagaaattgcttatc
atgggcggtggtatcatcggtcttgaaatgggtacggtttaccactctctaggttctaaa
gttgaagttgttgagatgttcgaccaagttatcccagcggcggataaagacatcgttaaa
gtcttcactaagcgtattaagaataagttcaagctaatgcttgaaactaaagtaacggct
gttgaagcaaaagaagatggtatctacgtttcaatggaaggcaagaaagcgccagctgaa
gctgagcgttacgatgctgttcttgttgctatcggccgtgttccaaacggtgcacttatc
gacgctgaaaaagcaggtatcgaagttgatgagcgtggcttcatcaatgttgataagcaa
atgcgtacaaacgttcctcacatccacgcgatcggtgacgttgttggtcaaccaatgctt
gctcacaaaggtgtgcatgaaggtcacgtagctgctgaagttatctctggtaagaagcac
tacttcgaccctaaagtaatcccatcaattgcgtacactgagccagaagttgcttgggta
ggtaagactgagaaagaagcgaaagctgaaggcatcaactacgaagttgctactttccct
tgggctgcttctggtcgtgcaatcgcttctgactgtgcagatggtatgactaagatgatc
ttcgataaagagactcatcgcgtaatcggtggtgctgttgttggtactaacggtggtgaa
cttcttggtgaaatcggcctagcaatcgaaatgggttgtgacgcagaagatatcgctctt
actatccacgctcacccaactctacacgagtctgttggtctagctgcggaagtattcgaa
ggttcaatcactgaccttccaaacaagaaagctgtgaaaaagaagaagtaa

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