Vibrio gigantis: MID13_13045
Help
Entry
MID13_13045 CDS
T08202
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgi03016
]
MID13_13045 (truD)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MID13_13045 (truD)
Transfer RNA biogenesis [BR:
vgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MID13_13045 (truD)
Prokaryotic type
MID13_13045 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ULN63832
LinkDB
All DBs
Position
1:complement(2934709..2935755)
Genome browser
AA seq
348 aa
AA seq
DB search
MSDILSSLAYLNGKPTAKAKLKAKAEHFVVNEDLGFEFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGEPDFSAFLAQYPSIEILATARHN
KKLRPGDLVGNQFELTLSEVTDCDDVVKRLEKVSQVGVPNYFGAQRFGNEGNNLSEARRW
GRDNVRTRNQNKRSLYLSAARSWIYNLILSDRIEQDVFASALVGDIVVKDGAQLTVTADN
LEAVNQGVANGSALVTVALAGDNALPTSDESQALEQKHLDAEPDLMALIRGNRMRHDRRE
ASLKPTDLTWEVNEDNVTLKFSLDAGCFATAIVRELVEEVHVERSYEQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcttcattggcttatctaaacggtaaaccaactgcgaaagcaaaa
ctaaaagcaaaagccgaacactttgtcgttaatgaagacttgggttttgaatttactggt
gaaggcgagcatctaatggttcgcatccgtaaaacgggtgagaacacgagtttcgtagcc
aatgagttggctaaagcctgtggcgttaagtcgaaagacgtaagctgggctggcttgaaa
gaccgtcacgcagtgaccgagcagtggttgagtgtacacctacctaaaggtgagcctgac
ttttcagcgttcttagcacagtacccaagcatcgaaattcttgcgacagcgcgacacaac
aaaaagttacgtccgggtgatttagttggcaaccaattcgagttgaccttgtctgaagta
acggactgcgatgatgtcgtaaaacgtttagaaaaagtctctcaagtgggcgtgccaaac
tattttggtgctcagcgttttggtaacgaaggtaataacttgtctgaagctcgtcgttgg
ggccgtgataacgttcgtactcgtaatcagaacaaacgtagcttgtacctttctgcggct
cgctcgtggatttacaacttaatcctttctgaccgtattgagcaagatgtatttgcctct
gcattggttggcgatatcgtggttaaagatggtgctcaactaacggtgacggctgacaac
cttgaagctgtaaaccaaggtgtggcgaatggttctgcattggtgacggttgctttggcc
ggtgataacgctttgccaacgagtgatgagtctcaagctttagagcagaagcaccttgat
gctgaaccggatctgatggctctaattcgtggtaaccgtatgcgccatgaccgccgtgaa
gcatcactgaaaccaacggatttaacttgggaagtgaatgaagataatgtcacgcttaag
ttttctcttgatgcgggttgtttcgcaaccgcgatcgttcgcgaattggttgaagaagta
cacgtagagagaagctacgagcaataa
DBGET
integrated database retrieval system
