Vibrio gigantis: MID13_13920
Help
Entry
MID13_13920 CDS
T08202
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MID13_13920 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vgi03021
]
MID13_13920 (rpoA)
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_13920 (rpoA)
Enzymes [BR:
vgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MID13_13920 (rpoA)
Transcription machinery [BR:
vgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MID13_13920 (rpoA)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MID13_13920 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ULN63974
LinkDB
All DBs
Position
1:complement(3096511..3097503)
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQINTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccgcgtcttgttgacattgaacagatcaat
acgacacacgcgaaagtaactcttgagccattagagcgcggtttcggccacactctaggt
aatgctcttcgccgcattcttctatcttctatgccgggttgtgccgtaacagaagttgaa
attgaaggtgtgctacacgaatacagcactaaagaaggcgttcaggaagatatcctggaa
atccttctaaaccttaaaggtttggctgtacgcgttgctgaaggcaaagatgaagtgttt
attacactgaacaaatcaggctcaggccctgttgttgcaggtgacatcacccacgatggt
gatgtagagatcgctaaccctgagcacgtaatttgtcacctaacggatgacaacgctgag
atcgctatgcgtatcaaagtagaacgtggtcgtggttacgttccagcttcagctcgtatc
catactgaagaagatgagcgtcctatcggtcgtctactagttgacgctacttacagcccg
gttgataaaatcgcttacgctgtagaagcggcacgtgtagaacaacgtactgatttagac
aagcttgttatcgatatggaaacgaacggtactctagaacctgaggaagcaatccgtcgt
gcagctactattttagctgaacaactggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatcctatcctactacgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtttgaaagcagaagcgattcactacatcggt
gatcttgtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatct
cttacagagattaaagatgtgcttgcttcacgtggtctttctctaggcatgcgtctagaa
aactggccaccagcgtcaatcgctgaagattaa
DBGET
integrated database retrieval system
