Vibrio gigantis: MID13_14605
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Entry
MID13_14605 CDS
T08202
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vgi
Vibrio gigantis
Pathway
vgi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MID13_14605 (fis)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vgi03000
]
MID13_14605 (fis)
03036 Chromosome and associated proteins [BR:
vgi03036
]
MID13_14605 (fis)
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_14605 (fis)
Transcription factors [BR:
vgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
MID13_14605 (fis)
Chromosome and associated proteins [BR:
vgi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
MID13_14605 (fis)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MID13_14605 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Xre-like-HTH
Baseplate_J_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ULN64104
LinkDB
All DBs
Position
1:3238530..3238826
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVSELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttcagaagcattgacagtaactacagttacatcacaagac
caaatcacgcagaagccactacgtgactcagttaaagcatcattgaaaaattaccttgct
caattaaacggtcaagaagtcagcgagttatacgaattagtattagctgaagttgaacag
ccactactagacactatcatgcagtacactcgcggtaaccaaactcgcgcagcaaccatg
atgggtattaaccgcggtactcttcgcaagaaacttaaaaaatacggcatgaactaa
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