Vibrio gigantis: MID13_14855
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Entry
MID13_14855 CDS
T08202
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgi03016
]
MID13_14855 (trmA)
Enzymes [BR:
vgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
MID13_14855 (trmA)
Transfer RNA biogenesis [BR:
vgi03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
MID13_14855 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_11
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Methyltransf_12
PrmA
DREV
DUF6579
Motif
Other DBs
NCBI-ProteinID:
ULN64133
LinkDB
All DBs
Position
1:3292045..3293154
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AA seq
369 aa
AA seq
DB search
MANLDVNPQRYQEQLAEKTERLTEMFSEYNVPELEVYESPEQHYRMRAEFRVWHEGDDMY
YVMFNQETKEKYRVDQFPAASRLINDLMPLLTDAMKDNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLGEQWIQDAKALKQQLNDEGFNLNLIGRARKMKIVLDRDYVIEKLDVNGDSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQDSKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEDFTVAMEGKREFRRLQQANIDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYDRIMYISCNPETLKENLEILSETHDITRFALFDQFPYTHHME
AGVFLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagatgtaaacccgcaacgctaccaagaacaactggcagaaaagactgag
cgtcttactgaaatgttctcagaatataatgtgcctgagctggaagtgtatgaatctcca
gaacaacactaccgcatgcgtgctgaattccgcgtgtggcatgaaggtgacgatatgtat
tacgtcatgttcaatcaagagactaaagaaaaataccgtgtagatcagttccctgctgct
agtcgccttatcaatgacttgatgcctctattaacagatgcaatgaaagacaaccattct
ctgcgccacaagctattccaagtagatttcctttctacactaagcggcgaaattttggtg
tctctgctttaccaccgtcagttgggtgagcagtggattcaagatgctaaagcacttaaa
cagcaattaaacgatgaaggttttaacctaaacctaattggccgtgcacgtaagatgaaa
atcgtactagaccgcgactacgtgattgaaaagctagacgtaaatggcgatagctacatc
taccaacaagtagaaaacagctttactcaaccaaacggcaaagtagccgagaaaatgttg
gagtgggctgtcgactgtacccaagacagcaaaggcgacttacttgagctttactgtggt
aacggtaacttctcattagcgctggcacaaaacttcgagcgtgtactggcaacagaacta
gcgaagccatcagtagaatcagcacaatacaacattgcggcgaacaagattgaaaatgtt
cagatcatccgtatgtctgcagaagattttaccgtagcaatggaaggcaagcgtgagttc
cgccgtctgcagcaagcgaacatcgatctcaagagctacaactgcaacactatctttgtt
gatccaccgcgctcaggtatggatgtggatacttgtaagatggtgcaaggctacgatcgc
atcatgtacatctcttgtaacccagaaacattgaaagagaacctagagatcctcagcgaa
acacacgacattactcgttttgctctatttgaccagttcccttacacgcaccatatggaa
gcaggagtgttcttagagcgtaaagcatag
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