Vibrio gigantis: MID13_15205
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Entry
MID13_15205 CDS
T08202
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MID13_15205 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgi03019
]
MID13_15205 (recQ)
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_15205 (recQ)
Enzymes [BR:
vgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MID13_15205 (recQ)
Messenger RNA biogenesis [BR:
vgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MID13_15205 (recQ)
DNA repair and recombination proteins [BR:
vgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MID13_15205 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ULN64193
LinkDB
All DBs
Position
1:complement(3366299..3368137)
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AA seq
612 aa
AA seq
DB search
MTATLIAEQTPTPANDAQTILQDVFGYQTFRDGQQEVIDLAVEGQDSLVIMPTGGGKSLC
YQIPALVREGLTLVISPLISLMKDQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSGQL
KMVYVSPERVLMRDFIERLQGLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVP
YMALTATADDATRKDIISRLQLIDPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKG
NCGIIYCGSRKKVEMVTEKLCNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDEKE
EGPQKQVEMHKLNAMSAFAEAQTCRRQVLLNYFGEYREKQCGNCDICLDPPKHFDATQEA
QKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHSHDYWISIFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMSLELAVPRLDTAVRNAKSDKLSSKNYDKKL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEVLPTSYGEMLAVNGVGQRKLDKYADPF
LDLIQEHITTHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccactctgattgctgagcaaacaccaactcctgcgaatgatgcgcaaaccatc
ttacaagatgtgtttggctatcaaacctttcgcgatggtcagcaagaggttattgatctg
gccgtggaaggccaagatagcttggttattatgccaaccggtggcggtaaatctctgtgt
taccagattccagccctagtacgtgaagggctcactctggttatctcaccgcttatctcg
ctgatgaaagaccaagttgatcagttgaaagctaatggtgtggcagcagagtgcattaac
tcttcaatgcctcgcgaccaattgctaagtgtgtttaatcgcatgaactcaggtcagctg
aaaatggtatatgtgtcaccagagcgcgtgttgatgcgtgactttatcgagcgtctacaa
ggcctaccgctttcgatgatagcggtcgatgaagcgcactgtatctcgcagtgggggcat
gatttccgtccagaatatgcctcgttaggccagcttaaacagtatttccctcatgtgccc
tacatggcgcttacagcaactgctgatgatgcgacgcgcaaagatattatctcgcgtttg
cagttgatagatccgcacacttatttaggtagcttcgatcgccctaacattcgctacaac
ttggttgagaaacacaagccggtgtctcaggtggttcgctacctagaaacacaaaagggg
aactgcggaatcatctattgcggcagccgtaaaaaagtagagatggtgactgagaagctg
tgtaacaacggtattcgcgctgcgggttaccacgcaggcatggacaccgatgagcgcgct
tacgttcaagaagctttccaacgtgatgatatccagattgttgtcgcgactgtggcgttt
ggtatggggatcaacaaacccaacgtacgctttgtggtgcactttgatattccacgtaac
atcgaatcttattatcaagagactggccgtgctggtcgtgatggtttgcctgctgaagct
atgatgctgtttgaccctgctgatatggggtggctgcgtcgtatgctggatgaaaaagaa
gaaggtccacagaaacaggttgagatgcataagctaaacgcgatgagtgcctttgcagaa
gcacaaacttgtcgtcgtcaggttctgctcaactactttggcgaatatcgtgagaagcaa
tgcggcaactgcgatatctgcctcgacccaccaaaacactttgatgcgacccaagaggcg
caaaaggcgttgtcttgtgtgtaccgtgtgaatcagtcctttggtatgggctatgtggtt
gaagtgatgcgtggtatgcagaatatccgtgtccgcgataatggtcatgacaagctctct
acctacggtattggccgtgaccatagccacgactactggatcagtatcttccgtcagctg
attcataaaggcttgttgttccagaacatcactcgtaactcgacattacagttaacagaa
gaagcccgcccgctgctgcgtggtgagatgtctttggagttggctgtgcctcgtttagat
acagcggtgcgcaatgctaagtctgataagctaagcagtaagaactacgataagaagttg
tttgctaagctgcgtaagctgcgtaagtcgattgcagatgaagatggcttgccaccatat
gtggtattcagtgatgcgacgctgattgatatggctgaagtattgccaacctcatacgga
gagatgctagcggttaatggtgttggtcaacgtaagctcgataagtacgccgatccattc
ttggatttgattcaagagcacatcacgacacacggctag
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