Vibrio gigantis: MID13_15305
Help
Entry
MID13_15305 CDS
T08202
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00730
Thiamine metabolism
vgi01100
Metabolic pathways
vgi01240
Biosynthesis of cofactors
Module
vgi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MID13_15305 (thiC)
Enzymes [BR:
vgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MID13_15305 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ULN64213
LinkDB
All DBs
Position
1:complement(3387903..3389852)
Genome browser
AA seq
649 aa
AA seq
DB search
MSSRKQARLEAKNFIDSLSVQPYPNSKKAYIQGSREDIQVPVREISLADSLVGGTKKEPV
FEPNAPIQVYDTSGVYTDPTHEIDLYSGLPKLREQWIEERGDTELLDDVSSVYTKERLED
ETLDDLRYGNLPRIRRATGDQCVTQLHYARQGIITPEMEYIAIRENMGRQKFADEQLNHQ
HPGHNFGANLPKEITPEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAEDLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSIADANDEAQFSELRTLGELTKVAW
EYDVQVIIEGPGHVPMHLIKENMDEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPETARSFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAIEIKMLDNPLEGMRQKSQEFRDTGSELYHPAVGSKEAQLEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgtaaacaagcaagactggaagcgaagaatttcattgattctttatccgta
caaccttacccaaattcaaaaaaggcttacatccaaggatctcgagaggacattcaagtc
cctgtacgagaaatatcgcttgctgacagcctagttggtggcaccaaaaaagagcctgta
ttcgaacctaatgcacccattcaagtctacgatacctccggtgtttataccgatcctacg
catgaaatagacctttatagcggccttcctaagttgcgagagcaatggattgaagagcgt
ggcgatacggaattgctcgatgatgtaagctctgtttacaccaaagaacgtttagaagat
gaaaccctagacgaccttcgttacggaaatctccctagaattcgtcgcgctactggcgac
caatgtgtaactcaactgcattatgctcgtcagggtattatcactcctgagatggagtat
attgcgatacgtgagaacatgggacgtcagaagtttgctgacgaacaacttaatcaccaa
caccctggccataactttggcgccaacctacctaaagaaatcacccctgagttcgtgcgt
aaagaggttgctgaaggtcgagctattatcccttcaaacatcaaccacccagaatcagaa
cctatgattattggtagaaacttcttagtgaaagtgaacgccaatatcggtaactcttca
gtaagctcttcaattgaagaagaagttgagaagttagtatggtcaacccgctggggtggc
gacaccgtaatggacctttctactggacgtaatatccacgagactcgtgaatggatcctg
cgtaacagccctgtgccgattggtacggttcctatgtatcaagcgcttgaaaaagtgaat
ggcgttgcagaagacctaaactgggaagtgatgcgcgataccttgattgaacaagcagag
cagggtgttgattacttcactatccacgcaggtttgctgcttcgttacgtacctatgacg
gctaaacgtgtgactggcattgtctctcgtggtggatctattatcgcgaaatggtgtctt
gcacatcatcaggaaagcttcctatacacacacttccgcgagatctgcgagatctgtgcg
aagtacgatgttgctctgtcattaggtgacggcctacgtccaggctcgattgcagatgct
aacgatgaggctcaattctcggagttacgcactctaggtgagttgactaaagtggcttgg
gagtatgacgttcaggtgatcattgaaggccctggacatgtacctatgcatcttattaaa
gagaacatggacgagcagttagagcactgccatgaagcgcctttctatactttaggtcca
ctgactacagatattgcgccgggttatgaccatattacctctggtattggtgcagccatg
atcggctggtacggctgtgcgatgctttgttatgtaacgcctaaagagcatttaggcttg
ccaaacaaagaagatgtgaagactggcttgattacttacaagctggcagcacatgctgca
gacttggcaaaagggcacccgggcgcacaaatccgagataatgcattgtctaaagcacgt
tttgaattccgttgggaagaccaatttaatctagctttagatccggaaacagcacgttct
ttccacgatgaaaccctgccacaagagtcgggcaaggttgctcacttctgctctatgtgt
ggtcctaagttctgctcgatgaagatttctcaagaagttcgagagtatgcgaaagacaca
gaacaagtagccgctgatcaggctatcgagattaagatgctggataacccgttggaggga
atgcgtcaaaaatcacaagagttccgtgatactggctctgaactttaccaccctgcagta
ggctcaaaagaagctcaattagaggaataa
DBGET
integrated database retrieval system
