KEGG   Vibrio gigantis: MID13_15845
Entry
MID13_15845       CDS       T08202                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vgi  Vibrio gigantis
Pathway
vgi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MID13_15845
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vgi02022]
    MID13_15845
Two-component system [BR:vgi02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   MID13_15845
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_16 AAA BrxC_BrxD AAA_2
Other DBs
NCBI-ProteinID: ULN66600
LinkDB
Position
2:52475..53815
AA seq 446 aa
MQRIALIEDDAIVRQATSQWLQLAGFDVTAFEVGQDALSAVKQGDFHTIISDVRLPDIDG
VELLGRFKSLVPEVPVILITGHGDVDMAVKALHQGAYDFIEKPFDPERLSQTVSEAVEKY
QSSQDRVNRQSYLNNLKGIEQVLIGRSKVMCELREQIQKVASIDTNVIIYGETGCGKELV
ASCLHEFSERKRHPFVPLNCGAIPENLFESELFGHEAGAFTGAAKRRIGKLEFADKGTVF
LDEIESMPLSMQVKVLRTLQDNVVERVGGNQQQHVDLRVVSASKCDLLNHPDFRQDLFYR
LNVAQLHLPPLSEREDDALILFEHFTQEANSETRVASEADRHALLSYAWPGNVRELRNVA
IRFALDESLTVGDILACRPNSVTESATAGIPLAVQVQSFERKVIHDALVRYQGRINDVMQ
DLDLPRRTLNQKMVRYALNRSDYVES
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcaacgtatagctttgattgaagatgatgcgattgtgcgtcaagcaaccagccagtgg
ttacagttggccggcttcgacgtcactgcgtttgaggttgggcaagatgcgttaagcgca
gtaaagcaaggcgattttcacaccatcattagtgacgtgcgtttgcccgatattgatggg
gtggaattacttggaagatttaagagtttggtgccagaagttccagttattttgattacc
gggcatggtgatgttgatatggcggtaaaggcgttacaccaaggcgcctatgatttcatc
gaaaagccatttgatcctgagcgcctttcccaaactgtctctgaggcggtcgagaagtat
caaagcagccaagacagagttaaccgccaaagctacttaaataacctaaaaggcattgag
caggttttgattggtcgcagcaaggtgatgtgcgaactgcgcgaacaaatacagaaggtg
gcttccatagacactaatgtgatcatttatggagaaactggctgtggtaaggagttagtc
gcttcttgcttgcatgagtttagcgaacgtaaaaggcacccttttgtgccgcttaactgt
ggcgctattccagaaaatttgtttgaaagcgaactgtttggccatgaagctggggctttc
actggtgcagctaagcgacgcatcggtaagcttgaatttgccgacaaaggcacggtcttc
cttgatgagatcgagagcatgccgttgtctatgcaggtcaaagtgctgcgaactttacaa
gacaatgtcgttgagcgtgtggggggtaaccagcagcaacacgttgatttgagggtagta
tctgcctcgaaatgtgacttattgaatcatcctgactttcgccaagacttattctatcgt
ctgaacgttgcccagttgcacttgcctccgctcagtgagcgtgaggatgacgctttgatt
ctttttgaacactttactcaagaagcgaacagcgaaactcgagtagccagtgaagcggat
cgccatgccttattgtcgtatgcgtggccagggaatgtgcgtgaacttcgcaatgttgcg
attcgttttgcgttggatgaaagcctaacggttggggatatattggcgtgtcgccccaat
tcggtaacggaatctgccacagcgggaattccgttggcggtgcaggtacagagtttcgaa
cgtaaggtgattcacgatgcgttagtgcgttatcaagggcgcattaatgatgtgatgcaa
gacttagatctacctcgccgaacattgaaccaaaaaatggtgcgctatgcactgaatcga
agcgactatgtcgaatcttag

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