Vibrio gigantis: MID13_19130
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Entry
MID13_19130 CDS
T08202
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00260
Glycine, serine and threonine metabolism
vgi00460
Cyanoamino acid metabolism
vgi00630
Glyoxylate and dicarboxylate metabolism
vgi00670
One carbon pool by folate
vgi00680
Methane metabolism
vgi01100
Metabolic pathways
vgi01110
Biosynthesis of secondary metabolites
vgi01120
Microbial metabolism in diverse environments
vgi01200
Carbon metabolism
vgi01230
Biosynthesis of amino acids
vgi01240
Biosynthesis of cofactors
vgi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MID13_19130
09102 Energy metabolism
00680 Methane metabolism
MID13_19130
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MID13_19130
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MID13_19130
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MID13_19130
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MID13_19130
Enzymes [BR:
vgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MID13_19130
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ULN67222
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Position
2:complement(828691..829983)
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AA seq
430 aa
AA seq
DB search
MNAYQNHSLDSFFSTNLSATDDAVFAGIQAENTRQNEQIELIASENIVSKAVMQAQGTCL
TNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKQLFKCEYVNVQPHSGAQANGAVKLALLQ
PGDTILGMSLDAGGHLTHGARPAMSGKWFNAVQYGVDRDTLEIDYEAVRALAIENQPKMI
IAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHKT
LRGPRGGMILTNHEDINKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFNTYIDSVI
DNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNVTEEALERAGITCNKNGIPFD
TEKPMITSGIRLGTPAGTSRGFGTEEFKLIGEWIGDVLDGLVESPEGNAEVEQRVRKQVK
ELCKRFPLYR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttaccaaaaccatagcttagacagttttttctctacgaacctatctgcgact
gacgacgcagtatttgctggaatccaagcagagaacactcgtcaaaatgaacaaatcgaa
cttattgcttctgagaacatcgtttctaaagcagtaatgcaagctcaaggcacttgccta
accaacaaatacgctgaaggctaccctggccgtcgttactacggtggttgtgagcacgta
gataccgttgaagctatcgcgattgaacgcgctaaacagcttttcaaatgcgaatatgta
aacgtacagcctcactctggcgctcaagcaaacggcgcagttaaacttgccctacttcaa
cctggcgatactatcctaggcatgtctctagatgctggtggccaccttactcacggtgct
cgtcctgcaatgtcaggtaagtggttcaacgcagttcaatatggcgtagaccgcgacaca
cttgaaatcgattacgaagcggttcgcgctttagcaatcgaaaaccaaccaaaaatgatt
attgctggtggtagtgctattccacgcgtaattgatttcgctaagttccgtgaaatcgct
gacgaagttggcgcaatcttaatggtcgatatggcacacatcgcgggtcttatcgcgaca
ggtgctcaccctagcccactaccacacgcacacgttgttacaacaacaacgcacaaaaca
cttcgtggcccacgcggcggtatgattctgactaaccacgaagacatcaacaaaaagatc
aactctgcagtattccctggcctacaaggcggcccactaatgcacgttatcgcagctaaa
gcagtagcgtttggcgaagcacttggcccagaatttaatacttatattgattcagtgatc
gacaacgcaaaagttcttgctgaagtgttgcaaactcgcggttgtgacatcgtgactggc
ggaacagacacgcacctaatgttggttgaccttcgtcctaagggcttgaaaggtaacgta
actgaagaagcattagagcgtgcggggatcacatgtaacaaaaatggcataccattcgac
acagagaagcctatgattacctctggcattcgtttaggtacgccagctggaaccagtcgt
ggttttggcactgaagaattcaaacttatcggtgaatggatcggtgatgttcttgatggc
ttagttgaaagccctgaaggcaacgctgaagttgagcaacgtgttcgcaagcaagttaaa
gagctttgcaagcgcttccctctttaccgttag
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