Vibrio gigantis: MID13_19390
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Entry
MID13_19390 CDS
T08202
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00550
Peptidoglycan biosynthesis
vgi01100
Metabolic pathways
vgi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MID13_19390 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MID13_19390 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
MID13_19390 (mrdA)
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MID13_19390 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MID13_19390 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ULN67272
LinkDB
All DBs
Position
2:complement(891794..893692)
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AA seq
632 aa
AA seq
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MNHKRVKMRDHKIEVNLFKNRVIVAFCGILLFTLVLVGNLYRLQVENFKSYQTRADGNRI
KVLPIAPTRGLIYDRNGVLLAENKLVFDLTMIPEKTDDVDAMLAKLNKYVPRDAEQIDRF
KKRYHNTRRFKSVTILENLTEEEIAKFSVHQYQFPGLSIDTSLKRFYPNGEVLTHVLGYV
AHINDRDLRKLEEQGVEANYQATTIIGKLGVERYYEDILHGTKGYQEVEVNSRGRIVRTI
EYVPPVAGKDIVLNIDLELQKYVFEQLDHRTGSAVILDPKDNSVLAMASSPSYDPNLFVD
GISSKNYQRLLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLQEHVISEDTIRNDHGVWR
IPGSKRNSKSWRDWKRWGHGPVDVTQAIEESVDSFFYQTAFDLGIDRISSWMNRFGFGEP
TGIDIYEESTANMPTREWKMMRYRTPWYQGDTVPIGIGQGYWTSTPMQLAKATSVLVNHG
KVMPPHILRATLEHGEDFSTQQLVEPEPMPSITEVPDRVWDVPLNAMRLVNHGSRGSGRR
AFKGSGYTSGGKSGTAQVFDLAKDQVYNSKKLARHLLDHALYTAFAPYENPEYVATVVIE
HGNGGSKVGAPYIRKVLDYAFEHKSGENKDHS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaacgcgttaagatgcgtgaccataaaatcgaagtgaacctattcaaaaac
cgtgtaatcgtagcgttttgtgggatcctgctgttcactcttgtcttagtcggcaactta
taccgacttcaagtcgaaaattttaaaagctatcaaactcgtgccgatggaaacagaatc
aaagtactgcctatcgcccctactcgtggccttatttacgaccgtaacggcgtcttgctc
gcagagaacaaacttgtttttgatctgactatgattccagagaaaaccgatgatgtcgat
gcgatgctcgccaaactaaataaatacgtcccgcgtgatgctgagcagatcgatcgtttc
aaaaaacgttaccacaacacccgccgttttaagtcggtgactattctagagaacttaact
gaagaagaaattgcgaagttctccgtgcaccagtaccaattccccggcttgtctattgat
accagcttaaagcgtttttaccccaatggtgaggtacttacccatgtactcggctacgtt
gcacacatcaacgatcgcgatcttagaaagctcgaagaacaaggggttgaagcgaattat
caagccacaacaatcataggtaagctcggtgttgaacgttactatgaagatattctacac
ggtactaagggttatcaagaagtcgaggtaaacagccgtgggcggattgtccgaaccatc
gaatatgtgccgccagtagctggcaaagatattgtgcttaatattgaccttgagctacaa
aaatacgtctttgaacaacttgatcacagaaccggaagcgcggttattctcgatccgaaa
gacaacagcgtgttggcgatggcatcaagcccgagttatgaccctaacctatttgtcgac
ggcatttcgagtaagaactaccaacgtctattaaatgatcctgctcacccgttggtcaac
cgcacgactcttggtgtttatcctccggcatcaaccgttaagccatttatggctgtggcc
ggactgcaagagcatgttatctcagaagatacgattcgtaacgaccacggcgtttggaga
attcccggttctaagcgaaactctaaatcgtggcgagactggaaacgttggggtcatggg
cctgtcgatgtaacccaagccattgaagagtcggtggactcattcttctatcaaaccgct
tttgatttaggtattgaccgtatatcaagctggatgaatcgctttggttttggcgaaccg
acaggtatcgatatctatgaagaaagtaccgccaacatgccaactcgagaatggaagatg
atgcggtatcgaaccccatggtaccaaggtgacaccgtccctattggtattggacaaggt
tattggacgtcgacaccaatgcaacttgctaaagcaacttcagtgctggtcaatcacgga
aaggtgatgccacctcatatcttaagagccaccttagaacatggtgaagattttagtacg
cagcaacttgtcgagcccgagccaatgccctcaatcactgaagtgcccgatagagtttgg
gatgtgccactcaacgcaatgcgactcgtaaaccacggcagtcgtggtagtggcagacgt
gcatttaaaggaagcggctacactagcggcgggaaatctggtaccgcacaagtgtttgat
ctagcgaaagatcaagtctacaactcaaagaaactcgctcgacatttacttgaccatgcg
ctctacacggctttcgcaccttatgaaaaccctgaatatgtcgcgacagtggttatcgaa
cacggcaacgggggttcaaaagtcggcgcaccttatatccgtaaagtactcgactatgcg
tttgagcataaaagtggtgagaacaaagaccactcttag
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