KEGG   Vibrio gigantis: MID13_19390
Entry
MID13_19390       CDS       T08202                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vgi  Vibrio gigantis
Pathway
vgi00550  Peptidoglycan biosynthesis
vgi01100  Metabolic pathways
vgi01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MID13_19390 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    MID13_19390 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vgi01011]
    MID13_19390 (mrdA)
Enzymes [BR:vgi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     MID13_19390 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:vgi01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   MID13_19390 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: ULN67272
LinkDB
Position
2:complement(891794..893692)
AA seq 632 aa
MNHKRVKMRDHKIEVNLFKNRVIVAFCGILLFTLVLVGNLYRLQVENFKSYQTRADGNRI
KVLPIAPTRGLIYDRNGVLLAENKLVFDLTMIPEKTDDVDAMLAKLNKYVPRDAEQIDRF
KKRYHNTRRFKSVTILENLTEEEIAKFSVHQYQFPGLSIDTSLKRFYPNGEVLTHVLGYV
AHINDRDLRKLEEQGVEANYQATTIIGKLGVERYYEDILHGTKGYQEVEVNSRGRIVRTI
EYVPPVAGKDIVLNIDLELQKYVFEQLDHRTGSAVILDPKDNSVLAMASSPSYDPNLFVD
GISSKNYQRLLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLQEHVISEDTIRNDHGVWR
IPGSKRNSKSWRDWKRWGHGPVDVTQAIEESVDSFFYQTAFDLGIDRISSWMNRFGFGEP
TGIDIYEESTANMPTREWKMMRYRTPWYQGDTVPIGIGQGYWTSTPMQLAKATSVLVNHG
KVMPPHILRATLEHGEDFSTQQLVEPEPMPSITEVPDRVWDVPLNAMRLVNHGSRGSGRR
AFKGSGYTSGGKSGTAQVFDLAKDQVYNSKKLARHLLDHALYTAFAPYENPEYVATVVIE
HGNGGSKVGAPYIRKVLDYAFEHKSGENKDHS
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgaatcataaacgcgttaagatgcgtgaccataaaatcgaagtgaacctattcaaaaac
cgtgtaatcgtagcgttttgtgggatcctgctgttcactcttgtcttagtcggcaactta
taccgacttcaagtcgaaaattttaaaagctatcaaactcgtgccgatggaaacagaatc
aaagtactgcctatcgcccctactcgtggccttatttacgaccgtaacggcgtcttgctc
gcagagaacaaacttgtttttgatctgactatgattccagagaaaaccgatgatgtcgat
gcgatgctcgccaaactaaataaatacgtcccgcgtgatgctgagcagatcgatcgtttc
aaaaaacgttaccacaacacccgccgttttaagtcggtgactattctagagaacttaact
gaagaagaaattgcgaagttctccgtgcaccagtaccaattccccggcttgtctattgat
accagcttaaagcgtttttaccccaatggtgaggtacttacccatgtactcggctacgtt
gcacacatcaacgatcgcgatcttagaaagctcgaagaacaaggggttgaagcgaattat
caagccacaacaatcataggtaagctcggtgttgaacgttactatgaagatattctacac
ggtactaagggttatcaagaagtcgaggtaaacagccgtgggcggattgtccgaaccatc
gaatatgtgccgccagtagctggcaaagatattgtgcttaatattgaccttgagctacaa
aaatacgtctttgaacaacttgatcacagaaccggaagcgcggttattctcgatccgaaa
gacaacagcgtgttggcgatggcatcaagcccgagttatgaccctaacctatttgtcgac
ggcatttcgagtaagaactaccaacgtctattaaatgatcctgctcacccgttggtcaac
cgcacgactcttggtgtttatcctccggcatcaaccgttaagccatttatggctgtggcc
ggactgcaagagcatgttatctcagaagatacgattcgtaacgaccacggcgtttggaga
attcccggttctaagcgaaactctaaatcgtggcgagactggaaacgttggggtcatggg
cctgtcgatgtaacccaagccattgaagagtcggtggactcattcttctatcaaaccgct
tttgatttaggtattgaccgtatatcaagctggatgaatcgctttggttttggcgaaccg
acaggtatcgatatctatgaagaaagtaccgccaacatgccaactcgagaatggaagatg
atgcggtatcgaaccccatggtaccaaggtgacaccgtccctattggtattggacaaggt
tattggacgtcgacaccaatgcaacttgctaaagcaacttcagtgctggtcaatcacgga
aaggtgatgccacctcatatcttaagagccaccttagaacatggtgaagattttagtacg
cagcaacttgtcgagcccgagccaatgccctcaatcactgaagtgcccgatagagtttgg
gatgtgccactcaacgcaatgcgactcgtaaaccacggcagtcgtggtagtggcagacgt
gcatttaaaggaagcggctacactagcggcgggaaatctggtaccgcacaagtgtttgat
ctagcgaaagatcaagtctacaactcaaagaaactcgctcgacatttacttgaccatgcg
ctctacacggctttcgcaccttatgaaaaccctgaatatgtcgcgacagtggttatcgaa
cacggcaacgggggttcaaaagtcggcgcaccttatatccgtaaagtactcgactatgcg
tttgagcataaaagtggtgagaacaaagaccactcttag

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