Vibrio gigantis: MID13_19400
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Entry
MID13_19400 CDS
T08202
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vgi
Vibrio gigantis
Pathway
vgi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MID13_19400
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
MID13_19400
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GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ULN67274
LinkDB
All DBs
Position
2:complement(895808..897715)
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AA seq
635 aa
AA seq
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MKKIKTIDLDIPDDMESGWQNIVDLLAQITQVPAALIMRVHANYIEVFSTSRSKNNPYNK
GDAETLGNGLYCETVMESQQQLIVPDALADPNWENNPDIKLGLVSYCGIPLLWPNGELFG
TICILDSKENHYTPTYIKLLQSFRTSIESQLKTLFQHAKLTQMNRDLKNRVYTRTKDLAS
LNYSLNQEIDKRKAAEQKINFQKNHDLGTGFLNRNAFESRLNHKLLSQRRLTDSTFAVVH
IGFTNGRRIQARYGYNALDQVLVEYRKRIDSVSDIDVLTARPTSVDLVLAFSVKDLHQRL
EELCQTLVKVGHSEFDIESDKVHLHAFIGIAITNDEDDAESILQKSSEAMLACKDSGQKF
AYYSQSYTEEQTHINKIEGYLLQAVRNDDLMLYFQPKVCPLTHRWVGAEALLRWRHPVLG
DISNETLIHMAEQNGLIFEVGSFVLRNAIEKAKEWSEYVDDFKIGVNVSAIQLKNVHFAE
QVVHLLETYHLDPRFLELEVTESGLIADEVVAKNTLESLHDIGVTLSLDDFGTGYASFSY
LKKFPFDAIKIDKSFIDQMLNSHEDSEIVRSIVQIAKKLDLKVTIEGIESEVQEQFIINE
GCDVGQGYLYGKPMPSQEFEHSLINQNYLGTTRYA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaataaaaacgatagacttagatattccagacgatatggaatccggttggcag
aacattgttgacctcttagctcaaatcactcaagtgcccgccgcactcatcatgcgtgtt
cacgccaactatattgaagtattctcgaccagtcgcagtaaaaacaatccatacaacaaa
ggtgatgctgaaaccttaggcaatgggctttactgtgaaacggtgatggagtctcaacaa
caacttatagtgcccgatgccctcgccgatcctaactgggaaaacaacccagacataaag
cttggcttggtctcttactgcggaattccgctgctttggcctaatggtgaattgtttggc
accatctgcattttggattcaaaagaaaatcactatacgcccacctatatcaagctttta
caaagctttcgtacctcaatagagtctcagcttaaaactctgtttcagcatgccaagctc
actcaaatgaatagagacttaaaaaaccgtgtttacactcgaactaaagatcttgcgagc
ctgaattattcattaaatcaagagattgataagcgaaaagcagcagagcaaaaaatcaat
ttccaaaaaaatcacgatctgggtaccggctttttaaaccgaaacgcatttgagtcccgc
ttaaaccacaagctactgtcacagcgaaggctaacagacagtacattcgcagtcgttcat
attggttttaccaatggcaggcgaattcaagctcgatacggctataacgcgttagaccaa
gtacttgttgagtaccgaaaacgcatcgacagtgtttctgatatcgatgtattaactgca
cgccctacttcggttgacctcgtattggcgtttagcgttaaagatttgcaccaacgcctc
gaagaactctgccaaacgctagttaaggtcgggcattcagaattcgatatcgaaagtgac
aaagtgcatctgcatgcctttataggaattgcaattacgaacgacgaagatgatgcggaa
agtatcctccaaaaatcttctgaagcgatgttagcctgtaaagattcaggacaaaagttc
gcttactactctcaatcgtataccgaagaacaaacccacattaacaagatagaaggctat
ttgcttcaagccgttcgtaatgatgatcttatgctctactttcaacccaaagtatgccca
ttgacgcatcgctgggttggtgcagaggctttgcttcgttggaggcatcctgttttaggg
gacatatctaacgaaaccctcatacatatggccgagcaaaacggattgattttcgaagtg
ggaagttttgttctacgtaatgcgattgaaaaagccaaagagtggtccgagtacgttgac
gatttcaaaataggcgttaatgtgtctgcgattcaactcaagaatgtacattttgcagaa
caagtggttcacctacttgaaacctatcatctagaccctcgtttcctagaacttgaagtt
acggagagcgggctcattgcagatgaagtggttgccaagaataccttagagtcgttgcac
gacattggcgttacattgtcactagatgacttcggtacgggctacgcctctttcagttac
ctgaagaaattcccattcgatgccattaagattgataagagctttatcgaccaaatgctt
aactcacatgaagactcggaaattgttcgctctattgtccaaattgcgaaaaagctcgac
ctaaaagtgacaattgaaggcatagagtcagaggttcaggagcaatttattattaacgag
ggctgcgatgtgggccaaggctacctttacggaaagccaatgccgagccaagaattcgaa
cacagcttaatcaatcaaaactatttggggacaactcgttacgcttaa
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