KEGG   Vibrio gigantis: MID13_22175
Entry
MID13_22175       CDS       T08202                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vgi  Vibrio gigantis
Pathway
vgi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vgi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MID13_22175
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vgi02022]
    MID13_22175
Two-component system [BR:vgi02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   MID13_22175
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_2 AAA_5 AAA FleQ Mg_chelatase bpMoxR HTH_30 TrmB AAA_7 ThiG
Other DBs
NCBI-ProteinID: ULN66279
LinkDB
Position
2:complement(1497713..1499065)
AA seq 450 aa
MTSGKHIVLIDDETDVVEAVSEMLELEGFSVTSFTDPNLGLKSLKANSQSVVLCDVRMPQ
VDGLTLLSSIQHRAANVPVLLMSGHGDIPMAIEAMKLGAFDFLEKPLNASELVEKLDLAL
TQCQHNSPATLDDDQDTELPIESVVIGQSKAMDTIRKQVLALSHTGVDTIINGETGTGKE
VIARALHQFSRRKAKPFVAINCGGMTESIIESELFGHEAGSFTSANKKRIGKIEQANGGT
LFLDEIESMPIAVQIKLLRVIQERMIERVGGNELIPVDIVVVAASKADLASLSESGEFRA
DLFYRLNIASLNLPALRQRKEDIQVLFRHFVIQASHKYKTRPSTIYPEQIQQLCRHEWPG
NVRELRNVADRFVLGIVGDGFDLQSPICESIGEDFAFEKQMEQYERNVLTEALIESAGNI
NEVSSKLNLPRKTLYRKMKKHQLDKESFKA
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgacttcaggaaaacacatagttcttatcgacgatgaaacagacgttgttgaagcagtg
agtgaaatgttggagctcgaagggtttagcgtcactagctttaccgacccaaaccttggc
cttaaatcactcaaagcaaacagtcagtcggtggtgttgtgtgatgtgagaatgccacaa
gtagacggcttgactctacttagctcaatccagcatagggcagctaacgttcctgtgttg
ctgatgagcgggcatggtgatattccgatggcgatagaggcgatgaagttgggtgctttc
gattttctggaaaagccgcttaatgccagtgagttggtggagaagttagatttggcgttg
acacaatgtcagcacaacagccctgcaacgttagacgacgatcaggatacagaactaccc
attgaatctgtggttatcggccaatccaaagcgatggacaccatacgtaagcaggtgctc
gcgctgtctcatactggggttgataccattattaatggtgagactggaacaggaaaagag
gtgattgctcgtgcgttgcaccaatttagccgccgcaaggcaaagccgtttgtcgcgata
aactgcggtggcatgaccgagagtattattgagagtgaactgtttggtcacgaagcgggt
tcgtttaccagtgccaacaaaaaacgcatcggcaaaatagaacaagccaatggcgggact
ctgtttctcgatgaaattgaaagcatgccgattgccgtgcaaattaagctgttgcgcgtc
attcaagagcgaatgattgagcgcgttggtggtaacgagttaatcccggttgatatcgtg
gtggtagccgccagcaaagctgatctcgcgagcttgagtgaatcgggtgagttcagggcc
gatctcttctatcgccttaatattgctagcttaaaccttcccgcattgcgtcaacgtaaa
gaagacattcaggtgttgttccgtcattttgtgattcaagcgagccacaaatacaagaca
cgcccatcaacgatttaccctgagcagattcagcaactatgtcgacacgaatggcccggt
aacgtgcgtgaattacgcaatgtcgccgaccgatttgtacttggcattgtcggtgatggc
ttcgatctccaatcaccaatttgtgaatcaataggagaagacttcgcctttgaaaaacag
atggagcagtacgaaaggaatgtactgactgaagcgttgatagagagtgcaggcaatatc
aatgaggtctcgagcaagctgaatctaccacgcaaaacgctttatcgaaaaatgaagaag
catcaattggataaagagagtttcaaggcttaa

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