Vibrio gigantis: MID13_22360
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Entry
MID13_22360 CDS
T08202
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00550
Peptidoglycan biosynthesis
vgi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MID13_22360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vgi01002
]
MID13_22360
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
MID13_22360
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MID13_22360
Peptidases and inhibitors [BR:
vgi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MID13_22360
Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MID13_22360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ULN67335
LinkDB
All DBs
Position
2:complement(1538283..1539488)
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AA seq
401 aa
AA seq
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MKFRAKLRWRLALACLTLAGISAPSLAVVTPNPPELPAKGYVLMDFQSGTIIAEQNSRAI
LAPASLTKLMTAYVIGQEIKSGRLTWQDKVSVSENAWSAKFSESSKMFIQPGDEISVSNL
MKGVIIQSGNDASVALAEHIAGSEQAFVSLMNGWAKSLGLQDTNFVNAHGLDGEGIQTSP
LDMAILMRSIIKDVPDVYALYQERLFKWNEITQYNRNKLLWDKSINVDGGKTGYTENAGY
SLVSSATEGKMRLISVVMGTNSPQARTTASKNLLSYGFRFYDTKQVMQQNQVESQVRVWK
GDIEQVSAKIAEDAYLTMPRGLVDSLQKSVVMIVPLIAPVEQGAEVGKVVWKSNGNTVAS
YALVADQSVKQGSWMVRLWDSVKLWFGGLFSDLMGRIEVNE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagagcgaagcttcgatggcggctagcgttggcttgcttaacgttagcgggg
atcagtgcaccaagcttggcggtggtaacgcccaatcctcctgagttgcccgccaaaggt
tatgttttgatggactttcagtcaggcaccatcattgcagagcaaaactcacgcgcgatc
ttagcgcccgccagtttgacgaagttgatgacggcttatgtgattggacaagagattaag
tccggtagattgacatggcaggataaagtctcggtcagtgaaaatgcgtggtcggcaaaa
ttttcagagtcatccaagatgtttattcagcctggagatgagatttcggtctcgaacctt
atgaaaggggtgatcattcagtcgggtaacgatgcttctgtcgctttggccgaacatatt
gcgggaagtgagcaagcttttgttagcctaatgaatggttgggcgaaatcgcttgggctg
caagatactaactttgtgaatgcgcatggcttagatggcgaaggcatccaaacttctccg
cttgatatggcgattttgatgcggtcgatcatcaaggatgtaccagacgtttatgcgtta
taccaagagcgtctgttcaaatggaatgagatcactcaatacaatcgaaacaagctgctt
tgggacaagtccattaacgtcgatggtggcaaaacgggttacaccgagaatgctggctac
agcctagtcagctctgcgacggaaggtaagatgcggttgatatcggtcgtgatgggtacc
aatagcccgcaagcacgaaccacggcttcaaagaacctactgagttatggatttcgtttc
tacgataccaaacaagtgatgcagcagaatcaagtcgaatctcaggtgcgagtgtggaag
ggggatatcgaacaagttagtgccaagatagccgaagatgcgtacctgacgatgcctaga
gggttagtcgattcgctgcaaaaatctgtggtaatgattgttccgcttattgcgcctgtt
gagcagggagctgaggtgggtaaagtcgtctggaagagcaacggtaatacggtggcaagt
tacgctttagtcgcggatcaatctgtaaaacaaggctcttggatggtgcgactttgggac
agcgtcaaactttggttcggtgggctattctctgacttgatgggtcggattgaggtgaac
gaatga
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