Vibrio gigantis: MID13_23355
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Entry
MID13_23355 CDS
T08202
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgi03400
]
MID13_23355 (phrB)
Enzymes [BR:
vgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MID13_23355 (phrB)
DNA repair and recombination proteins [BR:
vgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MID13_23355 (phrB)
Prokaryotic type
MID13_23355 (phrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ULN66498
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All DBs
Position
2:1773888..1775318
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AA seq
476 aa
AA seq
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MSDILWIRRDLRIHDNPALVAAIENGVSVAVFISTPQQWQQHHLAPIKADFIYRHLKQLE
SQLAEFGIILLHLKATDFDDQSRQLVDLCRQLDAQCVFANSEPEVDEQARDQKLISSGLN
LKISDCDVMLPLGSVLNKQGEMFKVFTPFKNAWLKEVQAKGITCSPALVAPAKLQQTQRS
QEELSNDLRALRISAEYDFDFPRVDSSRWPLSQEVLGNVIPHFLANKVNNYARLRDIPSV
KGTSGLSPYLAIGAVSPRWLAIQLIQQQPDLLFDTQLPAFSWLNELIWRDFYKHLMFHHP
KLVKGANFQQKYNGLDWYHDHPSFKAWCEGKTGYPLVDAAMRQLVETGWMHNRLRMVVAS
FLTKHLLIDWRWGERFFMSHLIDGDFSANNGGWQWASSTGCDAQPYFRIFNPITQSEKFD
PKGIFIRKYIPELQNIPDKHVHFPHDFIAKNGIDSKYWPPIVEHKEARLRALAFFK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacattctatggatacgacgagacctgaggattcacgataacccggcactcgtc
gcagcaattgaaaacggcgtctctgtcgccgtttttatttcaacaccccagcaatggcag
caacaccaccttgcaccaatcaaagctgatttcatctatcgtcacctaaaacagcttgaa
tcccagctcgccgagtttgggatcatattgctgcacctaaaagctaccgattttgacgac
caatccagacagctcgttgacttgtgcaggcaacttgatgctcagtgtgtgttcgcaaat
tcagagccagaagtcgatgaacaagcgcgcgatcaaaagctgatttcaagtggcctaaac
ctcaagataagtgactgtgacgttatgctgccactcggtagcgttctcaacaaacaaggc
gagatgttcaaagtctttacgccctttaagaacgcgtggctaaaagaagttcaggcgaaa
ggcatcacctgtagtcctgctcttgtcgcacccgctaagcttcaacaaactcaacgttca
caagaagagctttctaacgacttaagagctttaagaatctccgctgagtatgatttcgac
tttcctcgtgttgattccagtcgttggccattaagccaagaagtgctgggcaatgtgata
cctcacttcctagccaacaaggtcaacaactacgcgcgcctgagagacattccctcggtt
aaaggaacatctggcctgtcgccttatttagcgattggcgctgtgagcccacgatggcta
gcgattcaattgattcaacaacagcccgatttgttgtttgatacacaactacctgccttt
tcttggcttaatgaattgatttggcgagatttttataagcatttgatgtttcaccatcct
aaactggttaaaggtgcgaactttcagcaaaaatacaacggcttagactggtatcacgat
catcctagcttcaaagcttggtgcgaaggaaaaacaggatatccattagttgatgcagcc
atgcgtcaactggttgaaacgggctggatgcacaacaggctaagaatggtcgtggccagc
ttcctgaccaagcacctgcttattgactggcgttggggcgaacgtttctttatgtcgcac
cttatcgacggcgactttagtgccaacaatggtggttggcagtgggcttcaagtactggc
tgtgacgctcaaccttacttccgaattttcaatccaatcactcagagtgaaaaatttgat
ccaaaaggaatttttattcgtaagtacataccagagctgcaaaacatcccagataagcat
gtgcatttcccacatgactttatcgctaaaaacggaatagacagcaaatactggcccccc
atcgttgagcataaagaagcacgattgagagccttagccttcttcaaataa
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