Variibacter gotjawalensis: GJW-30_1_00105
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Entry
GJW-30_1_00105 CDS
T05320
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00521
Streptomycin biosynthesis
vgo00523
Polyketide sugar unit biosynthesis
vgo00541
Biosynthesis of various nucleotide sugars
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01250
Biosynthesis of nucleotide sugars
Module
vgo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJW-30_1_00105 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJW-30_1_00105 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJW-30_1_00105 (rfbC)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GJW-30_1_00105 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAT57598
UniProt:
A0A0S3PP93
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All DBs
Position
127565..128035
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AA seq
156 aa
AA seq
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MESYSAARFASLGLDLAFVQDNQSFSVAKGVLRGLHYQLPPHAQDKLVRVLRGAIFDVAV
DIRKSSATLGKWVGLELSAKSANQMLIPKGFAHGFLTLEPETEVLYKVTDVYAPTADRSI
RFDDPTVAIQWPHIEAIQLSEKDQAAPYLAAAEIFA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctatagcgctgcgcgcttcgcgtcactcggactcgatctagcatttgttcaa
gataatcagtctttttcagtggccaaaggcgttctgcgtggccttcattatcagctgccg
cctcacgctcaagacaagctggttcgcgtgttacgcggcgcgattttcgatgtggccgtc
gatattcgcaaaagctcggcgacactcggtaaatgggtcggcctcgaactttccgcaaaa
tccgcgaaccaaatgctgattccaaaagggttcgcgcatggatttctcacgttagaacct
gaaacagaggtcttgtataaagttacggatgtctacgcgccgactgccgatcgttcgatc
cggtttgacgatccaacggtcgccatccaatggccacacatcgaagcaattcagctttcc
gaaaaagaccaagccgcgccctacctcgccgccgctgaaatattcgcctga
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