Variibacter gotjawalensis: GJW-30_1_00122
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Entry
GJW-30_1_00122 CDS
T05320
Symbol
ykoV_2
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GJW-30_1_00122 (ykoV_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_00122 (ykoV_2)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GJW-30_1_00122 (ykoV_2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BAT57615
UniProt:
A0A0S3PNX2
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All DBs
Position
complement(149002..149862)
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AA seq
286 aa
AA seq
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MAPRANWKGFLKIGELVCPVALYTAASSSDRISLHILNRDTGHRVKRLYVDSDTGKPVES
EDQVKGYAVAENEYVVLEPDEIAAAVPESTKTLDVEAFVQEDDIDQVYFDKPYYLAPSEK
QGEEAFALIRDGLRAKKVAALAQTVLFRRMRTVLIRDSGNGLVANTLNFDYEVRAAADAF
GDVPPLKIKGEMLQLAKHIIETKKGKFDPSKYEDRYEAALTAMVKAKIEGKELPVLKERK
AENVVDLMEALRMSAGVKKKEAAAKKKATAKVAAKKKTEAPRRKAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccagagcaaattggaaaggcttcctgaagatcggcgaactggtctgcccagtc
gccctctacacggcagcctcgagttccgaccgcatctcgctgcacattctcaatcgcgat
acgggtcatcgcgtgaagcggctttatgtcgatagcgacaccggcaagccggtcgagagc
gaagaccaggtcaaaggctacgcggtcgccgagaacgaatatgtcgtgctcgagcccgac
gagatcgcggctgccgtaccagaaagcacaaagacgctcgacgtcgaggctttcgttcag
gaagacgacatcgaccaagtctacttcgacaagccctactatctcgcccccagcgagaag
cagggcgaggaagctttcgcgctgatccgggatggcctgcgcgcgaagaaggtcgcggcg
ctggcgcagacggttctgttccgccgtatgcgcacggtgctgatccgcgatagcggcaac
ggcttggtcgcgaacacgctgaatttcgactacgaggtccgcgctgccgccgacgcgttc
ggcgatgtgccgccgctcaagatcaagggcgagatgctgcagctcgccaagcacatcatc
gagacgaagaagggcaagttcgatccgtcgaaatacgaggatcgctacgaggccgctttg
accgcaatggtgaaagcgaagatcgaaggcaaagagctgcccgtgctcaaggagcgcaag
gcggagaatgtcgtcgatctcatggaagcgctgcgcatgagcgccggcgtgaagaagaaa
gaagccgccgcgaagaagaaggcgacggccaaggtcgcggcgaagaagaagacagaggcg
ccgcgccgcaaagcaagctaa
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