Variibacter gotjawalensis: GJW-30_1_00371
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Entry
GJW-30_1_00371 CDS
T05320
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GJW-30_1_00371 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_00371 (xseA)
Enzymes [BR:
vgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GJW-30_1_00371 (xseA)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GJW-30_1_00371 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
BAT57861
UniProt:
A0A0S3PPJ7
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All DBs
Position
402828..404405
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AA seq
525 aa
AA seq
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MNEKVLVNSPEVSVSELSANLKRTLEDAYDHVRVRGELGKVSYHSNGHVYFDLKDDRACI
ASVIWRSSAGRLKIKLETGLEVIATGKITTYAGRSQYQLIVDRIEPAGIGALLAQLEERK
KKLAAEGLFDPARKQIIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRHVVVWPVRVQGD
GSAAEVANAIRGFNALAPGGRIARPDLIIVARGGGSLEDLWSFNEEIVARAAAESDIPLI
SAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRSELLAQISNLGRRSFASWTQRQERRR
ADLRGITRALPGPDRLLGERRQALDVAAQRLLRGLRAGTHTHGVRFHRVEARLAAQSPRE
QMRRLRKSVADWRTRFDQIGARLMLRPRERFAGLSERLKVGLVANRTAHATKIARDRQTL
NALHSRLGPAWDVGQDRRIAAIDRAESLLAALSYHGVLERGFALVRDADGKPVHSAKTVD
PAMRLDIEFADGRVVATAGEVAQAEPPKPRRRRRQAVNENQGTLF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaaaagtgctcgtcaacagcccggaagtcagcgtctcggagctctccgccaac
ctgaagcggacgctcgaagacgcctatgaccacgtgcgcgtgcgcggcgagctcggcaag
gtcagctaccactcgaacggccacgtctatttcgacctgaaagacgaccgcgcctgcatc
gccagcgtcatttggcgcagctcggccggccgactgaagataaagctcgaaaccggcctc
gaagtcatcgcgaccggcaagatcacgacttacgcaggccgctcgcagtatcagctgatc
gtcgatcgcatcgaaccggccggcatcggcgcgctgttggcgcagctcgaagaacgcaag
aaaaagctcgccgccgaaggcctgttcgacccggcacgcaagcagatcatcccgtttctg
ccgcgcgtcatcggtgtcgtaacctcgccgaccggtgcggtcattcgtgacatcctgcat
cgcctcgaagatcgcttcccgcgccacgtcgtcgtctggccggtccgcgtgcaaggcgat
ggctcggccgccgaagtcgccaacgcgatccgcggcttcaacgcgctcgcgccgggcggc
cgcatcgcgcggcctgaccttatcatcgtcgcgcgcggcggcggctcgctggaagatctg
tggtcgttcaacgaggaaatcgtcgcccgtgctgcggcggaaagcgacatcccgctgatc
tcggccgtcggccacgagaccgacacgacgctgatcgacttcgcctccgatcgccgtgcg
ccgacgccgaccgcagccgccgaaatggctgtgccggtgcgcagcgagctgctcgcacaa
atctccaatctcggccgccgtagcttcgcgtcatggacgcagcgccaggaacgccggcgc
gccgatctgcgcggcatcacgcgtgcgctgccgggccccgatcgtctgctcggcgaacgc
cgccaggctctcgacgttgccgcacaacgccttctgcgcggcctgcgcgccggcacgcat
acgcatggtgtccgcttccaccgcgtcgaagcgcggctcgccgcgcagtcgccgcgcgaa
cagatgcgccgcctgcgcaaaagcgtcgccgactggcgcacgcgtttcgatcagatcggc
gcgcgtttgatgctgcgcccgcgcgagcgcttcgccggcctcagcgagcgtctcaaagtc
ggcctcgtcgccaaccgtacggcgcacgccaccaaaatcgcgcgcgaccgccagacgctg
aacgcgctgcattctcgcctcggtcccgcctgggatgttggccaggatcgccgcatcgct
gccatcgaccgcgccgaaagcctgctcgcggcgctctcctatcacggcgttctggagcgc
ggcttcgcgctggtccgcgacgccgacggcaagcctgtccactcggccaaaaccgtcgat
ccggctatgcggctcgacatcgagttcgcggacggacgcgtcgttgcgaccgccggcgag
gttgcgcaggcggagccgccgaagccccgccgccgccgccgacaagccgtgaacgaaaac
caaggcacactcttttag
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