KEGG   Variibacter gotjawalensis: GJW-30_1_00533
Entry
GJW-30_1_00533    CDS       T05320                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vgo  Variibacter gotjawalensis
Pathway
vgo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GJW-30_1_00533 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vgo03400]
    GJW-30_1_00533 (alkA)
Enzymes [BR:vgo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     GJW-30_1_00533 (alkA)
DNA repair and recombination proteins [BR:vgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GJW-30_1_00533 (alkA)
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: BAT58020
UniProt: A0A0S3PQ11
LinkDB
Position
complement(554858..555505)
AA seq 215 aa
MSANLIHSEADLQTGLAVLLANDPRLAGVVEVAGAIPLRRREGGIEGLLRIVMGQQVSTA
SAEAIWLRLRAAYEPFDHTKLLRARVDKLQRVGLSGAKIKTLRAVARAVADGVIDFERLA
SIPADEAHAIMTSVHGIGPWTTDLYLLTCLGHGDAWPAGDLALQEAARLAFDLPARPTAK
DFTAMAEIWRPWRAVAARLLWSYYRVVKKREPVPI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtcggcaaacctcatccattccgaagcagacctgcagaccggccttgcggtgctgctc
gccaacgacccgcggcttgcgggcgtggttgaggtcgcgggcgcgattccgttaaggcgg
cgcgagggcgggatcgagggcttgctgcgcatcgtgatggggcagcaagtctcaaccgcg
agcgcggaagcgatctggctgcgtttgcgtgcggcgtatgagccgttcgatcacaccaag
ctgctgcgcgcgcgcgtcgataagctgcagcgcgtcgggctatcgggcgcgaagatcaag
acgctgcgcgccgtcgcgcgtgcggtggcggacggggtgatcgacttcgagcgcctcgcc
agcatcccggccgacgaggcgcatgcgatcatgacgtccgtgcacgggatcgggccatgg
acgacggacctgtatctgctgacgtgcctcggacatggtgatgcctggccggccggcgat
ctcgcgctgcaggaggctgcgcggctcgccttcgatcttccggcgcggccgaccgcgaaa
gatttcaccgcgatggcggagatttggcggccgtggcgcgcggtcgcggcgcggctgttg
tggtcgtactatcgtgtggtgaagaagcgcgagccggtaccgatctga

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