Variibacter gotjawalensis: GJW-30_1_00535
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Entry
GJW-30_1_00535 CDS
T05320
Symbol
oprF_1
Name
(GenBank) outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vgo02000
]
GJW-30_1_00535 (oprF_1)
Transporters [BR:
vgo02000
]
Other transporters
Pores ion channels [TC:
1
]
GJW-30_1_00535 (oprF_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
BAT58022
UniProt:
A0A0S3PPZ5
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All DBs
Position
complement(556416..557678)
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AA seq
420 aa
AA seq
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MLSFRSLAALCFGALVTITAAHADLGFPESVKFPPQIVVDPDQKLQQETVGETEFIVDAT
GSTTETKRGRHFTRWLTYRPARGEPALGYDNGSETRIFNAMRGALEKAGWALVYVDDNKA
RFVMRMSQGGRDNWLGIKMDAPQAQVNVDLVEVSGAPANALKLPPPGARPERIADNADIP
YLPPYPGSKLKGGGRGDGPLNISRPGSGEEVHVGGVVLTRNYQGPETLSKLQFIGEYREA
LIAADWEILFPNSAAAVNDNATLVAHFTKNGRDVWAKLDYEYGANLWYSVLDLGAEDLKS
KLDKDCSVALHGVFFDFNKATLKPESEAALTRAAALLTATPGAKIEVQGHTDNVGGDDYN
LKLSHARAESVMRWLTQHRIEAQRLSAKGYGKAQPFADNGTDIGRAKNRRVELSKVGCRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgtttcggtctctggccgcactgtgtttcggcgcgcttgtcacgatcacggcc
gctcatgccgatctcggctttccggaaagcgtgaagtttccgccgcagatcgtcgtcgat
cccgatcagaagctgcagcaggagacggtcggggagaccgaattcattgtcgacgcgacc
ggcagcacgacggaaacaaagcgcggccggcatttcacgcgatggctcacctatcggccg
gcgcgcggcgagccggcactcggttacgataacggcagcgagacgcgcatcttcaacgcc
atgcgtggcgcgctggagaaggcgggctgggcgctcgtctatgtcgacgacaacaaggcg
cgcttcgtgatgcggatgtcgcaaggcggccgcgacaactggctcggcatcaagatggat
gcgccgcaggcgcaggtgaatgtcgatctcgtcgaggtttccggcgcgcccgcgaatgcg
ttgaagttgccgccgccgggtgcgcggcccgaacgcatcgcggacaacgccgatattccg
tatctgcctccgtatccgggatcgaaactcaaaggcggaggacgtggcgacggcccgctg
aacatttcgcggccgggttcgggcgaggaggtccacgtcggcggcgttgtgctgacgcgc
aactatcagggaccggaaacgctctcgaagctgcaattcatcggcgagtatcgcgaggcc
ctcatcgcggcggattgggaaattctgttccccaatagtgccgcggctgtgaacgacaac
gcgacgctcgttgcgcacttcacgaagaacggccgcgatgtctgggcgaagctcgattac
gaatacggcgcaaacctctggtattcggtgctcgatcttggtgccgaggatttgaaatcg
aagctcgacaaggattgcagcgtcgcgctgcatggcgtgttcttcgatttcaacaaggcg
acgttgaagccggaatcagaagcagcactcacacgcgccgcagcgctgctcacggcgacg
ccgggcgcgaagatcgaggtgcaaggtcacaccgacaatgtcggcggcgacgactacaat
ctgaagctatcgcatgcgcgagccgaaagcgtgatgcgctggctcacgcaacatcgaatc
gaggcgcagcgtctgtcggcgaaaggttacggcaaagcgcagccgtttgccgacaacggc
accgacatcggacgcgcgaagaaccgccgcgtcgaactctcgaaggtcggctgcaggaaa
tag
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