Variibacter gotjawalensis: GJW-30_1_00576
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Entry
GJW-30_1_00576 CDS
T05320
Symbol
rhmD
Name
(GenBank) L-rhamnonate dehydratase
KO
K18983
D-galactarolactone cycloisomerase [EC:
5.5.1.27
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00053
Ascorbate and aldarate metabolism
vgo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
GJW-30_1_00576 (rhmD)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.27 D-galactarolactone cycloisomerase
GJW-30_1_00576 (rhmD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
BAT58062
UniProt:
A0A0S3PQJ4
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Position
complement(587024..588166)
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AA seq
380 aa
AA seq
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MSKIKKITAHVVSAPVQKPFTSSRGWLYSVRGTCLVEIETEDGIVGWGECYGPSAVAKSF
IDTQLGPRVIGMDPFDVEVIWESLYNRIKDYGMTGMAISAISGIDIALWDIIGKETGKPI
HKLIGGAFRTEVQAYATGLYFIDMNRLTEEAVEEAQKFVSEGFRAIKMKIGLGSAKRDYE
RVAAVRKAIGPDVRLMVDSNHCFSVPDAIRLGRKLEDLDIDWFEEPISPEDIDGYIEVTR
ALDMAVAGGENDFTRWGFRDKIVRKAMDIVQPDVCAAGGISECKKIAAMAITHGVECVPH
AWGSAVGLAATLHFIAAIPDQPPSLFPRPPLLEFEQEENPFRDHLAKTPIRQKNGIVKIP
DGPGLGIDVDRAVIEKYRKA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatcaagaaaatcacggcgcatgtcgtcagtgcgccggtgcagaagcctttt
acgtcgtcgcgcggctggctctacagcgttcgaggcacttgcctcgtcgagatcgagacc
gaagacgggatcgtcggctggggcgagtgctatgggccgtccgctgtcgcgaagagcttc
atcgatacgcagcttggcccgcgcgtcatcggcatggacccgttcgacgtcgaggtgatc
tgggagagcctctacaatcgcatcaaggactacggcatgaccggcatggcgatctccgcc
atttcgggcatcgacatcgcactgtgggacatcatcggcaaggaaaccggcaagccgatc
cataagctgatcggcggcgcgttccgcaccgaggtgcaggcttacgcaacggggctctat
ttcatcgacatgaatcgccttaccgaagaggcggtcgaggaagcgcagaaattcgtttcg
gaaggtttccgcgcgatcaagatgaagatcggtctcggctccgcgaagcgcgattacgaa
cgtgtcgccgccgtgcgcaaggccattgggccggatgtgcggctcatggtcgattccaat
cactgcttctcggtgccggacgcgatccgtcttggccgcaagctcgaagacctcgacatc
gattggttcgaggagccgatctcgcccgaagatatcgacggctatatcgaagtcacgcgc
gcgctcgatatggcggtcgctggcggcgagaacgatttcacgcgctggggcttccgcgac
aagatcgtgcgcaaggcgatggatatcgtgcagccggacgtctgcgcggccggtggcatt
tcggagtgtaagaagatcgccgccatggcgatcacgcacggcgtcgaatgcgtgccgcat
gcgtggggttccgcagtcggtcttgccgcgacgctgcatttcatcgcggcgattccggat
cagccgccgtcgcttttcccgcgtccgccgctgctcgaattcgagcaagaggaaaacccg
ttccgcgatcacctcgccaaaaccccgatccgccagaagaacggtatcgtcaagattcca
gacgggccgggtctcggcatcgatgtcgatcgcgccgtgatcgagaagtatcggaaggcg
tga
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