KEGG   Variibacter gotjawalensis: GJW-30_1_00748
Entry
GJW-30_1_00748    CDS       T05320                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
vgo  Variibacter gotjawalensis
Pathway
vgo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GJW-30_1_00748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vgo03021]
    GJW-30_1_00748
   03019 Messenger RNA biogenesis [BR:vgo03019]
    GJW-30_1_00748
Transcription machinery [BR:vgo03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     GJW-30_1_00748
Messenger RNA biogenesis [BR:vgo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GJW-30_1_00748
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: BAT58225
UniProt: A0A0S3PQH4
LinkDB
Position
complement(781264..782529)
AA seq 421 aa
MREMKLQDLKAKTPQELLAFADEHEVENGSTLRKQELMFAILKQLAAKEVNIIGEGVVEV
LSDGFGFLRSPEANYLAGPDDIYVSPSQIRRFGLRTGDTIEGDIRSPKEGERYFALLKVN
TINFEDPDKARHKINFDNLTPLYPDERLKMEHEDPTKKDYSARVIDIVAPIGKGQRALVV
APPRTGKTVLLQNIAHAIAANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKVADKRTFPA
IDITRSGTRKEELLTEKDTLKKMYVLRRILNPMGTMDAIDFLLDKLRNTKSNDEFFGSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaatgaagttacaagacctgaaggcgaagacgccgcaagagctgctggcgttc
gccgacgaacatgaagtcgagaatggctcgacgctccgcaaacaggagctgatgttcgcg
atcctcaagcaactcgccgccaaagaagtaaacatcatcggcgaaggcgtcgttgaagtt
ctgtccgacggcttcggctttttgcgctccccggaagcgaattacctcgccggcccggac
gacatttacgtttcgccctcgcagatccgccgctttggcctgcgcaccggcgacaccatc
gagggcgatatccgctccccgaaggaaggcgaacgatacttcgccctgctcaaggtcaat
acgatcaatttcgaagacccggacaaggcgcgtcacaagatcaacttcgataacctgacg
ccgctctaccccgacgagcggctcaagatggagcacgaggatccgaccaagaaggattac
tcggcgcgcgtcatcgatatcgtcgccccgatcggtaaaggccagcgcgcgctcgtcgtc
gcgccgccgcgtactggtaagacggttctgttgcagaatatcgcccacgcgatcgcggcg
aatcaccccgagtgctacctcatcgttctgctgatcgacgagcgcccggaagaagtcacc
gacatgcagcgctccgtgaagggcgaagtcatttcatcgaccttcgacgagccggcaacg
cgtcacgttcaggtcgccgaaatggtgatcgagaaggcgaagcgcctggtcgaacacggc
cgcgacgtcgtcatcctgctcgactcgatcacccgcctcggccgcgcttacaacacggtc
gtgccgtcatcgggcaaggtgctgaccggcggtgtcgacgcgaatgctctgcagcgcccg
aagcgcttcttcggtgccgcgcgtaacatcgaggaaggtggctcgctcacgatcatcgcg
acggcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
acgggtaactccgagctcatcctcgatcgtaaggttgcggacaagcgcacattcccggcg
atcgacatcacgcgttcgggtacgcgtaaggaagagctgctcaccgagaaggacacgctc
aagaagatgtatgttctgcgccgcatcctcaatccgatggggacgatggacgcgatcgac
ttcctgctcgacaaactgcgcaacacgaagtcgaacgacgagttcttcggctcgatgaat
acgtaa

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