Variibacter gotjawalensis: GJW-30_1_01166
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Entry
GJW-30_1_01166 CDS
T05320
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJW-30_1_01166 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_01166 (priA)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJW-30_1_01166 (priA)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJW-30_1_01166 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Zn_ribbon_PriA
ResIII
Helicase_C
RUBY_RBDX
ETF
USP19_linker
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAT58639
UniProt:
A0A0S3PRS2
LinkDB
All DBs
Position
1215477..1217651
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AA seq
724 aa
AA seq
DB search
MTAKRIVDVLVPVALDHPYSYGVPRGMTVETGQVVRVPLGPRESTGVVWGEGEWKPGLHN
RLKDITDIVPVPPLTDELRGFVDWLSNYTLSPRGMVLRMALRMNEHLGPERERVGIRLAG
PKPQRMTPARGRVLRLLEDGFVRPKGEAAREAGVSPSVIDGLVDDGALEAVALKPEPIAE
TPDPTYDVPTLTAAQEKAAGALREAVKAETFAVTLLDGVTGSGKTDVYFEAVAQAVRAGR
QTLILMPEIALTNAFLDRFAARFGVRPAEWHSQVAPRRRARTWAGIASGEIPVVVGARSA
LFLPFVNPGLIIVDEEHDAVYKQEDGVHYHARDMAVVRARIANVPIILSSATPSVETEVN
ARKSRYTRLSLPERFGGQQMPHMEAIDLKREGPIRGRYIAPRLAEAVGIAIERGEQALLF
LNRRGYAPLTLCRGCGHRLQCPNCDAWLVEHRFRRQLSCHHCGFTTSPPKSCPKCNAVDS
FVAVGPGVERLEEEVASLFPNARAMVLSSDLIVGVERMQQEFAEIAEGRVDIVVGTQLVA
KGHHFPKLNLVGVVDADMGLGQGDPRAAERTFQLLHQVAGRAGRETGQGHGFLQTHQPEH
PVIRALLSGDREAFYGSEIASREKFGYPPFGRLASLVVTGADKHKTEAHAKKLVALAPSD
PAVRILGPAEAPLALVRGRHRYRVLIKSPRAFDLSGYMRDWIALAPKMTGGIKREVDIDP
QSFL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaaacgcattgtcgacgtccttgtgccggtggcgctcgaccatccgtattcc
tacggtgtcccgcgcggcatgacggtcgagaccggccaggtcgtccgcgtgccgctcggg
ccgcgcgaatcgaccggggtcgtttggggcgaaggcgagtggaagcctggcctccataac
cgtctaaaggacatcaccgacatcgtgccggtgccgccgctcactgacgagctgcgcggc
ttcgtcgattggctctcgaactacacgctcagcccgcgcggcatggtgctgcgcatggcg
ctgcgaatgaacgagcatctcggccccgagcgtgaacgtgtcggcattcgcctcgcgggg
cctaagccgcaacgcatgacgccggcgcgcggccgcgtgctgcggctcctcgaagacggc
tttgtcaggccgaaaggcgaggccgcgcgggaggcaggtgtatctccgagtgtcattgac
ggcttggtcgatgatggcgcgctcgaagccgtcgcgctcaaacccgagccgatcgccgag
acgccggacccgacctacgacgtgccgacattaacggctgcgcaagagaaagccgccgga
gcgctgcgcgaagccgtcaaagccgagacattcgccgtcacgctgctcgacggcgtcacc
ggctcgggcaagaccgacgtctatttcgaagcggtggcgcaggccgtacgcgccgggcgc
cagacgctgatcctgatgcccgaaatcgcgctgaccaacgcgtttctcgaccgcttcgcg
gcacgcttcggcgtgcgtccggccgaatggcatagccaagttgcgccgcgccgccgtgcg
cgcacctgggccggaatagcgtcgggagagatcccggtcgtcgtcggcgcgcgctccgcg
ctgtttctccctttcgtcaatccgggcctcatcatcgtcgatgaggagcacgacgcggtc
tacaagcaggaagacggcgttcactaccacgcgcgcgatatggccgtagtgcgcgcccgc
atcgcgaatgtgccgatcatcctgtcgtcggcgacgccctcggtcgagaccgaggtcaac
gcgcgcaagagccgctacacgcggctgtctttgcccgaacgcttcggcggccagcagatg
ccgcatatggaagcgatcgatctcaagcgcgaaggcccgatccgcggtcgctatatcgcg
ccgcgtctcgccgaagcggtcggcatcgcgatcgagcgcggcgagcaggcgctgctgttc
ctcaaccggcgcggttatgcgccgctgacattgtgtcgcggctgcggccatcgcctgcaa
tgcccaaactgcgacgcgtggctggtcgagcatcgtttccgccgccagctctcgtgccat
cactgcggcttcacgacatcgccgccgaagagctgcccgaagtgcaatgcggtggattcg
ttcgtcgcggtcggccccggcgtcgagcggctggaggaggaagttgcgtcgctctttccc
aacgcgcgcgcgatggtgctctccagcgacctgatcgtcggggtcgagcgaatgcagcag
gaattcgccgagatcgccgaaggccgcgtcgatatcgtggtcggcacgcagctcgtcgcc
aaggggcaccatttccccaagctcaatctcgtcggcgtcgtcgatgccgatatggggctc
gggcagggcgacccgcgtgccgccgagcggacgttccagctcctgcaccaggtggcgggc
cgtgcgggccgcgagaccgggcagggccatggtttcctgcagacgcatcagccggagcat
ccggtcatccgcgcgctgctctcgggtgatcgcgaggccttctacggctccgagatcgcg
agccgcgagaaattcggctatccgccgttcggccgcctggcaagcttggtcgtgaccggc
gccgacaagcacaagaccgaggcgcacgcgaagaagctcgtcgcgctggcgccgagcgac
ccggctgtgcgcattctcgggcctgccgaagcgccattggcgctcgtccgtggccgccac
cgctaccgcgtgctgatcaaatcgccgcgcgcgttcgatttgtcgggctatatgcgcgac
tggatcgcgctggcaccgaaaatgaccggcggcatcaagcgcgaagtcgacatcgatccg
cagagctttttgtag
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