Variibacter gotjawalensis: GJW-30_1_01179
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Entry
GJW-30_1_01179 CDS
T05320
Symbol
rppH_2
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJW-30_1_01179 (rppH_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgo03019
]
GJW-30_1_01179 (rppH_2)
Messenger RNA biogenesis [BR:
vgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GJW-30_1_01179 (rppH_2)
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GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
BAT58652
UniProt:
A0A0S3PS05
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All DBs
Position
complement(1228171..1228674)
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AA seq
167 aa
AA seq
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MTRYEDLPYRQCVGVMVLNRKGDVFIGRRSGGAEHVDATHSWQMPQGGLDDGEEPFDGAL
RELHEETNIKSVTKLAEVDEWLAYDIPAAIGKKSWKGKYRGQTQKWFALRFTGVDKEIDI
LRPAGGAHKPEFVEWRWEPMRNVPKLIIPFKRPVYDRVVKEFAHLVK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctacgaagacctcccctaccgccagtgcgtcggcgtgatggtgctcaaccgc
aagggtgacgttttcatcggccgacgctccggcggcgccgaacatgtcgacgcgacacat
tcgtggcagatgccgcaaggcggcctcgatgacggcgaagagccgttcgacggcgcactg
cgtgagttgcacgaagagaccaacatcaagtcggtaacgaagcttgccgaggtcgacgaa
tggctcgcctacgatattccagcggcgatcgggaagaaatcgtggaagggcaagtatcgc
ggccagacgcagaagtggttcgcgctgcgcttcaccggcgtcgataaggagatcgacatc
ctccgcccggccggtggtgcgcataagccggagttcgttgagtggcgctgggagccgatg
cggaacgtgccgaagctcatcatcccgtttaagcggccggtctacgatcgcgtcgtgaaa
gaattcgcgcatctggtgaaatga
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