Variibacter gotjawalensis: GJW-30_1_01245
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Entry
GJW-30_1_01245 CDS
T05320
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_01245 (phrA)
Enzymes [BR:
vgo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GJW-30_1_01245 (phrA)
DNA repair and recombination proteins [BR:
vgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GJW-30_1_01245 (phrA)
Prokaryotic type
GJW-30_1_01245 (phrA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAT58718
UniProt:
A0A0S3PSB3
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All DBs
Position
1292485..1293921
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AA seq
478 aa
AA seq
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MASTALLWFRDDLRLGDNAALRAAAGADALVCLYVLEEEGVRPLGGASQWWLANSLRALD
AALREKGQKLILRSGNAAEIVPALADEIGASEVFWNRRYGPAEKIDGQVTRALKQRGIEA
KTFAGALLHEPDAIKGSTGAAPKIFAPFWKRLRAAGDPPAPIRAPSKWPSTKRVASDDLA
DWSLEPTKPDWAGDMRDAWAPGEDGARKRLHAFVDGALSTYADSRERADRDGSSRLSPHL
RFGEVSPTQVWHAAKHALDAPAKERPSPASVDKFLAELAWRDFAHHQLRAYPKIADENMR
DQFDRFPWSEERKGFTAWTRGQTGYPLVDAAMRHLWAEGWMPNRLRMLTASFLIKHLLSD
WRRGEKWFWDTLVDADPANNPTNWQWVAGSGIDSAPYFRIFNPVTQSEKADPDGDYVRKW
VPEIAKLPAQFLTAPWEASPMELEEAGVRLGKTYPEPIVDHKEARERALGALKKMTGK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccgctctcctctggtttcgcgacgatcttcgtctcggcgacaacgccgcg
ctccgcgccgcagcaggcgccgacgcgctcgtctgcctctacgttctggaggaagagggc
gtgcgcccgctcggcggtgcgtcgcaatggtggctggcaaattcgctgcgcgcgctcgac
gcggcgctgcgcgagaagggccagaagctgatcctgcgcagcggcaatgcggccgagatc
gtgccggcgctcgcggatgagatcggcgcgagcgaagtgttctggaatcgccgttacgga
ccggccgagaagatcgacggacaagtgacgcgcgcgctgaagcagcgcggcatcgaggcg
aagactttcgcgggcgctttgttgcacgagccggacgcgatcaaaggctctactggcgct
gcgccaaagatcttcgcgccgttctggaagcgcctgcgcgcggcaggcgatccgccggcg
ccgatacgggcgccatcgaaatggccgtcgacgaagcgcgtcgccagcgacgatctcgcc
gattggtcgctcgagccgacgaagccggactgggccggcgacatgcgcgacgcgtgggca
ccgggcgaagacggtgcgcgcaagcgcctgcacgctttcgtcgacggcgcgctatcgacc
tatgcggacagccgcgaacgcgctgaccgcgatggctcgtcgcgtctgtcgccgcatctg
cgtttcggtgaagtctctcctacgcaagtttggcacgccgctaagcacgcgctcgatgcg
cccgcgaaggagcggccgtcgcccgcgtcggttgacaaattcctcgccgaactcgcgtgg
cgcgatttcgcgcatcaccagctgcgcgcatatccgaagatcgcggacgagaacatgcgc
gatcagttcgatcgctttccgtggtcggaggagcgcaagggtttcacggcgtggacgcgc
gggcagaccggctatccgctggtcgatgccgcgatgcgccacctttgggccgagggctgg
atgccgaaccgcctgcgcatgctgaccgcgtcgttcctcatcaagcatctccttagcgac
tggcggcgcggcgagaagtggttctgggacacgctcgtcgatgcggacccggcgaacaac
ccgaccaactggcagtgggtcgccggcagcggcatcgattccgcgccgtatttccgcatc
ttcaatccggtgacgcagagcgagaaggccgaccctgacggcgactacgtgcgcaaatgg
gtgcccgagatcgcgaagctgccggcacagtttctcacagcgccgtgggaggcctcgccg
atggagcttgaggaagccggcgttcggctcgggaagacttatccggagccgatcgtcgat
cacaaggaagcgcgcgagcgcgcgctcggcgcactcaagaagatgaccggaaagtag
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