Variibacter gotjawalensis: GJW-30_1_01253
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Entry
GJW-30_1_01253 CDS
T05320
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00020
Citrate cycle (TCA cycle)
vgo00190
Oxidative phosphorylation
vgo00650
Butanoate metabolism
vgo00720
Other carbon fixation pathways
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01120
Microbial metabolism in diverse environments
vgo01200
Carbon metabolism
Module
vgo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vgo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vgo_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GJW-30_1_01253 (sdhA)
00650 Butanoate metabolism
GJW-30_1_01253 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GJW-30_1_01253 (sdhA)
00720 Other carbon fixation pathways
GJW-30_1_01253 (sdhA)
Enzymes [BR:
vgo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GJW-30_1_01253 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAT58726
UniProt:
A0A0S3PS01
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All DBs
Position
1301968..1303800
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AA seq
610 aa
AA seq
DB search
MATNGNGAAAPGVNGKAYPIEDHTFDVVVVGAGGAGLRATVGCSEAGLRTACITKVFPTR
SHTVAAQGGISASLGNMGQDDWRWHMYDTVKGADWLGDQDAIEYLCRNAPAAIYELEHWG
VPFSRTQEGKIYQRPFGGMTTNYGKGTAQRTCAAADRTGHAILHTLYGQAVRHSAQFFIE
YFAIDLIMDDDGQCRGVIALKLDDGTIHRFRAQTTILATGGYGRAYFSCTSAHTCTGDGN
AMVLRAGLPLEDMEFVQFHPTGIYGAGCLITEGSRGEGGYLVNAEGERFMERYAPSAKDL
ASRDVVSRAMTIEIREGRGVGKQKDHIYLHLDHLDPKILHERLPGISESARIFAGVDVTR
EPIPVLPTVHYNMGGIPTTYRGEAKTKKNGDAETVVSGLMAIGEAASVSVHGANRLGSNS
LTDLVVFGRAAGLRCAEQLEAGAQQPDLPKDSAERALSRLDRFRNASGSTPTAELRLKMQ
KVMQTNCAVFRTGEVLDEGQKLIHQVYGGMKDVGVTDRSLIWNSDLVETLELDNLLGLAV
VTMESALNRQESRGAHAREDFPDRDDQNWMKHTLAWLDYDTGKVSIDYRDVHTYTLSNDV
SYIEPKARVY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaatggaaacggcgctgccgctccgggcgtcaacggcaaggcttacccgatc
gaagatcacaccttcgacgtcgtcgttgtcggcgccggcggcgcgggtctgcgcgcgacg
gtcgggtgttccgaagccggcctgcgcaccgcctgcatcaccaaggtgttcccgacgcgc
tcgcacacggtggcggcgcagggcggcatctcggcctcgctcggcaatatgggccaggac
gattggcgctggcacatgtacgacaccgtcaagggcgccgactggctcggcgaccaagac
gcgatcgaatatctctgccgcaacgcgccggccgcgatctacgagctcgagcactggggc
gtgccgttctcgcgtacgcaggaaggcaagatctaccagcgcccgttcggcggcatgacg
acgaactacggcaaaggcactgcccagcgcacctgcgcggcggccgaccgcaccggccac
gccatcctgcacacgctgtatggccaagccgtgcgacactcggcgcagttcttcatcgaa
tacttcgccatcgacctcattatggatgacgacggccagtgccgcggcgtcatcgcgctc
aagctcgacgacggcaccatccatcgcttccgtgcgcagacgacgatcctggcgaccggc
ggctatggccgcgcctacttctcctgcacgtccgcgcatacctgcacgggcgacggcaac
gcgatggtgctgcgcgccggcctgccgctcgaggacatggagttcgtccagttccacccg
accggcatctacggcgcgggttgcttgatcactgaaggctcacgcggcgagggcggttac
ctcgtcaacgcagaaggcgagcgcttcatggagcgctatgcgccgtccgcgaaggacctc
gcctcgcgcgacgtcgtctcgcgtgcgatgacgatcgaaattcgcgaaggccgcggcgtc
ggcaagcagaaggatcatatctatctgcatctcgaccatctcgacccgaagatcctgcac
gaacgcctgccgggcatctcggaaagcgcacgcatcttcgccggcgtcgacgtgacgcgc
gagccgatcccggtgctgccgaccgtccactacaacatgggcggcattccgacgacgtat
cgcggcgaagccaagaccaagaagaacggcgatgccgagactgtcgtctccggcctgatg
gcgatcggcgaagccgcatcggtctcggtgcatggcgccaaccgtctcggctccaactcg
ctgaccgacctcgtcgtgttcggccgcgcggcgggcctgcgctgcgccgagcagctcgaa
gccggcgcgcagcagccggatctgccgaaggactcggccgagcgcgcgctctcgcgcctc
gatcgtttccgcaatgcttcgggcagcacgccgaccgccgaactccgccttaagatgcag
aaggtcatgcagaccaactgcgcggtgttccgcaccggcgaagtgctcgacgaaggccag
aagctcatccatcaagtctacggcggcatgaaggatgtcggcgtcaccgatcgctcgctg
atctggaactccgacctcgtcgaaacgctggaactcgacaatctgcttggcctcgcggtc
gtcacgatggagtctgcgctcaaccgtcaggaaagccgcggcgcgcatgctcgcgaggac
ttcccggatcgcgacgaccagaactggatgaagcacacgctcgcctggctcgattacgac
accggcaaggtgtcgatcgattatcgcgacgtgcacacctacacgctctcgaacgatgtc
tcgtacatcgagccgaaggcgcgtgtgtactga
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