Variibacter gotjawalensis: GJW-30_1_01254
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Entry
GJW-30_1_01254 CDS
T05320
Symbol
sdhB_2
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00020
Citrate cycle (TCA cycle)
vgo00190
Oxidative phosphorylation
vgo00650
Butanoate metabolism
vgo00720
Other carbon fixation pathways
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01120
Microbial metabolism in diverse environments
vgo01200
Carbon metabolism
Module
vgo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vgo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vgo_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GJW-30_1_01254 (sdhB_2)
00650 Butanoate metabolism
GJW-30_1_01254 (sdhB_2)
09102 Energy metabolism
00190 Oxidative phosphorylation
GJW-30_1_01254 (sdhB_2)
00720 Other carbon fixation pathways
GJW-30_1_01254 (sdhB_2)
Enzymes [BR:
vgo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GJW-30_1_01254 (sdhB_2)
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer2
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
BAT58727
UniProt:
A0A0S3PS15
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All DBs
Position
1303836..1304615
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AA seq
259 aa
AA seq
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MVEFSLPRNSKVTEGKTWPKPEKAEHVTEFRVYRWNPDDEKNPHVDTYYVDRHDCGPMVL
DALIWIKSKVDATLTFRRSCREGICGSCAMNIDGTNTLACTRGMDEIDGTVKIYPLPHMP
VVKDLVPDLTNFYAQHASVQPYLQNITATPEKEWRQSEGQRNKLDGLYECILCACCSTSC
PSYWWNSDRYLGPAALLQAHRWLQDSRDEATGERLDFLEDPFRLYRCHTIMNCAKACPKG
LNPAKAIAEIKAKMVERQV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaattttcgcttccccgcaattcgaaggtcaccgaaggcaagacctggccgaag
cccgagaaggccgaacacgtcaccgaatttcgcgtctatcgctggaatccggacgacgag
aaaaatccgcacgtcgacacgtactatgtcgatcgtcacgattgcggcccgatggtgctc
gacgcgctgatctggatcaaatccaaagtcgacgcgacgttgaccttccgccgctcctgc
cgtgaaggcatctgcggctcgtgcgcgatgaacatcgacggcactaacacgctcgcctgc
acacggggcatggacgagatcgacggcaccgtgaagatctatccgctgccgcatatgccg
gtcgtgaaggatctcgtgccggacctgacgaacttctacgcgcagcacgcctccgtgcag
ccgtatctgcagaacattacggcgacgcccgagaaggaatggcgtcagagcgaaggtcag
cgcaacaagcttgacggcctctacgagtgcattctgtgcgcttgctgctcgacctcgtgc
ccgagctactggtggaattcggaccgctatctcggcccggccgcgctgcttcaggcgcac
cgctggctgcaggactcacgcgacgaagcgaccggcgaacgtctcgacttcctcgaagat
ccgttccgcctctatcgctgccatacgatcatgaactgcgccaaggcgtgcccgaagggc
ctcaaccccgccaaggcgatcgccgagatcaaggcgaagatggtcgagcgccaggtttaa
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