Variibacter gotjawalensis: GJW-30_1_01269
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Entry
GJW-30_1_01269 CDS
T05320
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00300
Lysine biosynthesis
vgo00470
D-Amino acid metabolism
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01120
Microbial metabolism in diverse environments
vgo01230
Biosynthesis of amino acids
Module
vgo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJW-30_1_01269 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GJW-30_1_01269 (dapF)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GJW-30_1_01269 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
AlgF
Motif
Other DBs
NCBI-ProteinID:
BAT58742
UniProt:
A0A0S3PS19
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Position
complement(1318036..1318911)
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AA seq
291 aa
AA seq
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MSTLGNHPFVKMNGLGNRIVVVDMRQKPLAISADEARAAAGPDGAPFDQMMALYPAKTPG
TDAFVRIYNTDGSEAGACGNGTRCIASLVAKETGKSKMTFETAAGLLDSWPNADGRFTVD
MGVPKFAWNEVPLADEFQDTRAIALQIGPIDKPILHSPSVMSMGNPHAIFWVDDVNAYDL
SRIGPMLENHPIFPERANISLAQVVSKEHLIVRTWERGAGLTLACGSAACAAAVSAARTR
RTGRTVTVTLPGGDLVIEWREKDNHVLMTGPVAYEYEGRFDPKLFAASDAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctcggcaatcatccgttcgtcaagatgaacgggctcggcaaccgcatcgtc
gtcgtcgacatgcggcaaaagccgttggcgatcagtgccgacgaggcgcgggctgccgcc
ggaccggacggcgcgccgttcgatcagatgatggcgctctatccggcaaagacgcccggc
accgacgcgttcgtgcgcatctacaatacggacggttccgaagccggcgcctgcggtaac
ggaacacgctgcatcgcctcgctggtcgccaaggaaaccggcaagagcaagatgacgttc
gagacggcggccggtttgctcgactcctggccgaacgcggacggccgcttcacggtcgat
atgggcgtgccgaagtttgcctggaatgaagttccgctcgccgacgaatttcaggatacg
cgcgcaatcgcgctgcagatcgggccgatcgacaagccgattctgcactcgccgtcggtc
atgagcatgggcaacccgcacgcgatcttctgggtcgatgacgtcaacgcctacgatctc
tcgcgcatcggcccaatgctggagaaccatccgatcttcccggagcgcgcaaatatctca
ctcgcgcaggtggtgtcgaaggaacatctcatcgtccgcacgtgggagcgcggcgccggt
ttgacgcttgcctgtggttcggcggcttgcgcggcggcggtttcggccgcgcgcacacgg
cgcaccggccgcaccgtgacggtaacgctgccgggcggcgatctcgtcatcgagtggcgt
gagaaggacaaccacgtcctgatgaccgggccggtcgcgtacgaatacgaagggcgcttc
gacccgaagctgttcgcggcgagcgatgcggcctga
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