Variibacter gotjawalensis: GJW-30_1_01862
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Entry
GJW-30_1_01862 CDS
T05320
Symbol
lgrD
Name
(GenBank) linear gramicidin synthase subunit D
Organism
vgo
Variibacter gotjawalensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PP-binding
Motif
Other DBs
NCBI-ProteinID:
BAT59331
UniProt:
A0A0S3PTW5
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Position
1910128..1914255
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AA seq
1375 aa
AA seq
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MQSSDIDVVGDTDEKPRIEKGIAQAPLGRARGGGVQVVIREHTNNAVRWKQGERLHNLIE
DACQRFADLEAIVTDNETLTYAQYDRRANQMARYLMDQGVRSGDRVALLFDKSPETYIAM
LAVMKVNAAYVPLDAAFPIERVRFILGDAEVSAIVSISSYAERLSTLDVPKILVDADKRA
ILAKDDSPLTDVPPPIEPLAYIIYTSGTTGNPKGVGIGHASICNFVRVAAELYGYKPGDR
IYQGMTIAFDFSIEETWVPMIAGATLIPARSGSAMMGDELGDFLRDRHVTIMACCPTLLA
TIEQDVPELRLLLVGGEACPHNLVARWYRPGRQILNSYGPTEATVTCTLTELKPDKPVTI
GIPLSTYSIVILDPVEDKTMATGELGEIGIAGIGLALGYLNRDELTMKKFIKDFLQIDNN
PSGRIYRTGDLGRIDENGEIDYRGRIDTQVKIRGYRIELTEIEQVLLDLPEVAQAAVTTF
EPEEGLVEIVAYYAFKHGLSVERDAISQHLRSKLPPYMVPAFLEQLDAIPMTLSNKADHK
KLPKPNLQRFAPAEQGYVPPKNDTERTLSTVLAEVLRLERVSTESHFFEDLGANSLIMAR
FCSLLRKNPDMANVSMRDIYQNPTLADLALHLAGTEETTVVTTREVFHKPSDLSYILCGA
GQLAFYALYALFGLWVLDIGYRWAAAPETALAIFARSVVFAAGSFVVLTGISIVVKWLLI
GRFSQRAIPIWSFAYYRFWVVMTMMRTSPIAAFYGTPIYNVYLRLMGAKIGRNAVIACIH
PPICADVIEIGDNTILRKDSIVLGYRAQSNFIHIAPVKIGDNAFVGEASVLDIDTVMGDN
TQLGHASSLQSGQRVPDGKHYHGSPAVETTSDYCQVEGKEASALRHAFFGSVELIALILV
AGPLPVLGYHYWEQYSAATGVKLLEGSSILSLFGLSAILYFGVVVLGLASVLIIPRVCNM
FLKPNVTYSMFGFHHLMQTIILRVSNARFYTVLFGDSAFITSYMSYVGWNMNTVIQTGSN
MGSNQRHDNPFYCNIGTGTMVSDGLSMINTQMSATAFQLQETKIGENSYLGNDIFYPPNG
KTGVNVLLATKAMIPIDGPVRENVGILGSPSFEIPRMVDRDRAMNATIDEDKRQEALKKK
NVYNLVTALMFLGAQWMSFFIGLVLWSVALTHYDRFGLFGLLFAAGAIVVAYIALFVLLE
RASLQFGRLKPQLASIYDPYFWHHERHWKMGESPAAGLFPGTPFRPMIYRLLGMKVGRKV
FDCSRSITERTLTEVGTYANLNEGSVLQAHSLEEGVFKSDFIRMGLGCTVGPGAFVHYGV
TMENHVVLDADSFLMKGETLDDNTGWRGNPAKLARNHADYAQPRSNITIMAMAAE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatcggacatcgacgtcgtaggcgatacggacgaaaagccccgcattgagaag
ggcatcgcacaggccccgctcggccgggcgcgcggaggcggcgtccaggttgtcatccgc
gagcacaccaacaacgcggtgcgctggaagcagggggagcgcctgcacaacttgatcgag
gatgcgtgccagcgcttcgccgatctcgaagcgatcgtcaccgacaacgagacgctgacc
tacgcgcagtatgaccgccgcgccaaccagatggcgcgctacctgatggatcaaggcgtt
cgctccggcgaccgtgtcgcgcttctcttcgataaatcgcccgaaacctacatcgcgatg
ctcgccgtgatgaaggtgaacgcggcttacgtcccgctcgacgccgccttcccgattgag
cgcgtgcgcttcatccttggcgacgccgaagtttctgccattgtttcgatctcgagctat
gcggagcgcctctcgacgctcgatgtaccgaagatcctggtcgacgccgacaagcgcgcg
atcttggccaaagacgattcgccgctcaccgacgtgccgccgccgatcgaaccgctcgcc
tacatcatctacacgtccggcacgactggaaacccgaagggcgtcggcatcggccacgcc
agcatctgcaacttcgtgcgcgttgcggcagagctttacggctacaagccgggcgaccgt
atttatcagggcatgaccatcgcgttcgacttctcgatcgaggagacgtgggtgccgatg
atagccggcgcgacgctcattcctgcgcgctccggcagcgccatgatgggcgacgaactc
ggcgactttctacgcgaccgtcacgtgaccatcatggcgtgctgcccgacattgctcgcg
acgatcgagcaggatgtgccggagctgcgtctgctgctcgtcggcggggaagcgtgtccg
cataaccttgtcgcgcgctggtatcgccccggccgccagattctcaattcgtacggcccg
accgaagcgaccgtcacctgcacgctgacggagctcaagcccgataagcccgtgaccatc
ggcattccgctgtcgacttactccatcgtcattctcgatccggtcgaggacaagacgatg
gcgacgggcgaactcggcgagatcggcatcgcgggcatcggcctcgcgctcggctatctc
aaccgcgacgagctcacgatgaagaaattcatcaaagacttcttgcagatcgacaacaat
ccgtccggccgcatctatcggaccggcgatcttggccgtatcgacgagaacggtgagatc
gattaccgcggccgtatcgacacgcaggtgaagatccgcggctatcgcatcgaactcacc
gagatcgagcaggtgctgctcgatctgccggaggtcgcgcaggctgccgtgacgacattc
gagcccgaagaagggctcgtcgaaatcgtcgcttactatgcgttcaagcacggcttgtcg
gtagaacgcgacgcgatttcgcagcatcttcgctcgaagctgccgccctacatggtgccg
gccttcctcgaacagctcgacgccattccgatgacgctgagcaacaaggcggaccacaaa
aaactgccgaagccgaacttgcagcgtttcgcgccggccgagcagggctacgttccgccg
aagaacgatacggagcgcacgctaagcacggtgcttgccgaagtgctgcggctcgagcgc
gtttcgaccgagtcgcactttttcgaagacctcggcgccaactcgctgatcatggcgcgc
ttctgctcgctgctgcgcaagaatccggacatggcgaatgtctcgatgcgcgacatttat
caaaacccgacgctcgccgatctcgcgctgcatcttgccggcaccgaagagacgacggtg
gtgacgacgcgcgaagtgttccacaagccgtcggacctctcctacatcctgtgcggagcg
ggccagctcgcgttctatgcgctatacgcgctgttcggtttgtgggtgctcgacatcggc
tatcgctgggcggcggcgcccgagaccgcgctcgcgattttcgcccgcagcgtcgtcttc
gcggccggctcgttcgtggtgctgaccggcatctcgatcgtcgtgaagtggctgctcatc
ggccgcttcagccagcgcgccattccaatctggagctttgcttactatcgcttctgggtc
gtcatgacgatgatgcgcacgtcgccgatcgcagccttctacggcacgccgatctacaac
gtgtatctgcgcctgatgggcgcgaagatcggccgcaacgccgtgatcgcttgcatccat
ccgccgatctgtgccgacgtgatcgagatcggcgacaacacgatcctgcgcaaggactcg
atcgtgctcggttatcgcgcgcaatcgaatttcatccacatcgcgcccgtgaagatcggc
gacaacgccttcgtcggcgaggcaagcgtcctcgatatcgacaccgtgatgggcgacaat
acgcagcttggtcacgcttcgtcgctgcagagcggccagcgcgtgcccgacggcaagcac
tatcatggctcgccggccgtcgagacgacatcggattactgtcaggtcgaaggcaaggag
gcgagcgcactgcggcacgctttcttcggttccgtcgagctgatcgcgctgatcctcgtc
gccggtccgctccctgtgctcggctatcattactgggagcagtattccgccgcgaccggc
gtgaagctgctggagggctcgtcgatcctctcgctgttcggcctctctgccattctgtat
ttcggcgtggtggttctcgggctcgcgtccgttttgatcatcccgcgcgtctgcaacatg
ttcctaaaaccgaacgtgacgtactcgatgttcggcttccaccacttgatgcagacgatc
atcctccgtgtcagcaacgcgcgcttctacacggtgctgttcggcgactcggccttcatc
acgagctacatgagctacgtcggttggaacatgaacaccgtcatccaaaccggctcgaac
atgggttcgaaccagcgccacgacaatccgttctactgcaacatcgggaccggcacgatg
gtgtcggacggtctttcgatgatcaacacgcagatgtccgcgacagcgttccagttgcag
gaaacgaagatcggcgagaacagctatctcggcaacgacatcttctatccgccgaacggc
aagaccggcgtgaacgttctcctcgccaccaaggcgatgatcccgatcgatggcccggtg
cgcgagaatgtcggcattctcggctcgccgtcgttcgagattccgcgcatggtcgatcgc
gatcgcgcgatgaacgcgacgatcgacgaagacaagcgtcaggaagcgctgaagaagaag
aacgtctacaatcttgttaccgcactgatgttcttgggcgcgcagtggatgtcgttcttc
atcggcctcgtgttgtggtcggtagcactgacgcactacgatcgcttcggcctgtttggc
ctgctgtttgcggccggtgcgattgtcgtcgcctacatcgcgctgttcgtgctccttgaa
cgcgcgagcctgcaattcggccgcctcaagccgcagctcgcgtcgatctacgatccatat
ttctggcaccacgagcggcactggaagatgggcgagtcgccggccgcgggcctgttcccc
ggcacgccgttccgcccgatgatctatcgtctgctcggcatgaaggtcggccgtaaagta
ttcgactgcagccgctcgatcacggagcgcacgctcaccgaggtcggcacttacgccaat
ctcaacgagggctccgtgctgcaggcgcactcgctggaagagggcgtgttcaagtcggac
ttcatccgcatgggcctcggctgcacggtcggccccggcgcgttcgtgcactatggcgtc
acgatggaaaaccacgtcgtgctcgacgcggattcattcctgatgaagggcgagacgctc
gacgacaacacggggtggcgcggcaatccggcgaagcttgcccgcaatcacgcggactat
gcgcagccgcggtccaacatcaccatcatggcgatggctgccgaataa
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