Variibacter gotjawalensis: GJW-30_1_02183
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Entry
GJW-30_1_02183 CDS
T05320
Symbol
metC_1
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00260
Glycine, serine and threonine metabolism
vgo00270
Cysteine and methionine metabolism
vgo00450
Selenocompound metabolism
vgo00670
One carbon pool by folate
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01230
Biosynthesis of amino acids
Module
vgo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GJW-30_1_02183 (metC_1)
00270 Cysteine and methionine metabolism
GJW-30_1_02183 (metC_1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GJW-30_1_02183 (metC_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GJW-30_1_02183 (metC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgo04147
]
GJW-30_1_02183 (metC_1)
Enzymes [BR:
vgo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GJW-30_1_02183 (metC_1)
Exosome [BR:
vgo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GJW-30_1_02183 (metC_1)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAT59650
UniProt:
A0A0S3PUS7
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All DBs
Position
2253538..2254701
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AA seq
387 aa
AA seq
DB search
MSNSNQLGFSTRCVHAGQEPDPTTGAVMMPIYATSTFVQESPGKHKGYEYARSQNPTRMA
FERCIADLEGGTQGFAFASGLAATATVLECLDHGAHIVAADDLYGGTRRLFSRVRERSAG
LTTTYLDLSDPETLDKAIQPNTKLIWIETPSNPLLKLIDLERIAQIAKKRGVLCVADNTF
ATPWIQRPLEFGFDAVVHSTTKYLNGHSDMVGGTVVVGANNDLRERLGYLQNAVGSISGP
FDSFLALRGLKTLALRIERQSASAFKIAQWLEKHPRVKRVYYPGLESYPQHALAKRQMRA
FGGMISAELDGGLDFATRFLERCHLFALAESLGGIESLIEHPAIMTHASVPAEVRAALGI
SDGLVRLSVGIEDVDDLIAELETALAK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactccaaccaactcggcttttcgacccgctgtgtccacgcgggccaagagcct
gacccgacgaccggcgccgtcatgatgccgatctacgcgacctcgaccttcgtgcaggag
agccccggcaagcacaaaggctacgagtatgcgcgcagccagaatccgacccgcatggca
ttcgagcgctgcatcgccgatctcgaaggcggcacgcagggctttgcctttgcgtccggc
ctcgccgccaccgcgaccgtgctcgaatgcctcgatcatggcgcgcacatcgtcgcggct
gacgatctttacggcggcacgcgccgtttgttttcgcgcgtgcgcgagcgctcggctggc
ctcacgacgacgtatctcgatttgtccgacccggaaacgctggacaaagcgatccagccg
aacaccaagctgatctggatcgagacgccgagcaatccgctgctcaaactgattgatctc
gaacgtatcgcgcagatcgcgaagaagcgcggcgtgctttgcgttgccgataacaccttc
gcgacgccgtggatccagcgcccgttggagttcggtttcgacgccgtcgtccactcgacg
acgaaatatctcaacggccactccgatatggtcggcggcaccgtcgtcgttggtgcgaac
aatgatttgcgcgagcgcctgggttatctgcagaacgccgtcggctcgatttccggtcct
ttcgatagctttttggcgttgcgtggcttgaagacgctcgcgcttcgcatcgagcggcag
agtgcctcggcattcaagatcgcgcagtggctggaaaaacatccgcgcgtgaagcgcgtc
tattatccaggcctcgaaagctatccacagcatgcgctcgcgaaacgccagatgcgcgcg
ttcggcggcatgatctcggccgagctcgacggcggtctcgacttcgcgacgcgcttcctc
gagcgctgccatctcttcgcgctcgccgagagcctcggtggaatcgagagcctgatcgaa
catccggccatcatgacgcacgcgtcggtgcccgccgaggtgcgcgccgcactcggcatc
tcggatggtctcgtgcgtctgtcggtcggcatcgaggatgtcgacgatctcatcgccgag
cttgaaaccgcgctcgcgaaataa
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