Variibacter gotjawalensis: GJW-30_1_02225
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Entry
GJW-30_1_02225 CDS
T05320
Name
(GenBank) apolipoprotein A1/A4/E domain protein
Organism
vgo
Variibacter gotjawalensis
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Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
KMP11
Exonuc_VII_L
Gp-FAR-1
Motif
Other DBs
NCBI-ProteinID:
BAT59692
UniProt:
A0A0S3PUX0
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All DBs
Position
2294846..2300512
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AA seq
1888 aa
AA seq
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MANNPTKLKDPTEAALSAIQDALDLRDGKGADAPAEPAPVAVSPHPSAAPPVEHPGDIKR
TSDVAPPRRAAANDDRQSVGAILQALQEKPSRRPFVLAAIASLAWVAFGGYVSWSSGITA
NTPMLLVAGAAILLPVLMFFAIAYMIIRAYELRIASRSMTQVALRLAEPETLAGESINNI
GQAVRREVTAMSDGVERALSRASELESLVHKEVGALERSYNDNETRIRGLIEDLSSQRAA
LAGQADQIRSAIGSVQMSLAQELGSVSEQVSTSVNEAAQRITRSLAEKGESITTVLGRAG
DSMIDAIGDRGADLLDQLNRTSDEVSRTLDAANSRLVAALNFKTDELTDRIVDISGELSQ
TLSARLDRIADGLQEKTTGLADTLVKRTETAGTDLTRLTNELTSGLGKRSEEVVAKLIET
GSQMAETLVTRGDEVNQTIRSSGDSLALDLSLRGSDLVNKLEEAGNRITDTIVIRSNQTT
ETFERKADEVASLISARSNTIQETMAQRLAAFEDVVTREGTALADRLGHDAGNLGERISR
TLGELDHTITGRGSELIDRISQRSVEYHEAVRNNVDIFENRTAARLTEATIAVHDSLSGF
ESRSQERLANITSVLAANLDAFDTRADERLTQVSGVMSANLGSFEQRAEARAAEIAAAMK
ENLDHFERNSASHMDRIADVMREHGADLAQNLDGRVLQVESTLDGRTRALDDLLQTRVAE
IGRTLIERSDNMVGSLEERVGAVANAIEQHGSRLVGQIEHRAIEVDKAFNNRAVELSTGL
DSRITRFQELLVDRVEIVSSQIEARGAAAANVIAGRVDQLNQAVKTSTGEAERALTTVTA
SSADLIRTSAQEAQRTLVSLSSSTAEAIRSGAQEAARTLEGTAAQSVAGIRGATVDAGRS
IEVLAATTADVMRTGTRDAESALDAAIRAAAEQIRGEAANAERVLAAAATQTTDALGASA
EAAEHRVHALTANLTEALRLGTTDTERRMESLAIGIAQTVGTRSDEAERRMEMLAASVQQ
LLGSGVSDAERRMTSVAEQISSVVGNETQEAERRITGLVSLLSDRLGVGTQDAETRLHAL
NSLIGDTLGSGTLDAEIRMQTLLNTFQETLGSGTMDAERRLSTLASTLAERIGTGAHDAE
MRLRTLSVHIPETLDNSTTDIERRLETLANTAATTLRSGSDDFERRLSGISASTIDAVAA
SANEAQRLLGTVASSSANAIRTSAQDAERSLSTVAAGIQKFVTQNTDEVERTLQGVSAEV
VRSLSGKAEELNSTLGQRSEQLTRILDEKGSAFLNALDTTAKSITGDMTRIADTAVASLE
SRQAALAGEVSRATDEALTAMDQKATGLARAIAQNSEEIVRLITQAGSNASGSVSRVLSD
LETAGRAAVEKSQATSTAAVSEMLETHTTLRNDTQSLLERLREANTLLKDVLTNATENLG
TIEGTLSNRVKEFVAALTDVGERSGTASSDVERQVKSFQSATSGTLEQITAMAARFEEHG
GALTGAVRTLEENHRKSEAALSERHKALEGIVGAVQNKAESLDERFNRFSTLLQDTLNGA
ETRAREIARLVADASTEGSRAITSQYEQIRNVTDEERKRTQEAMRALYETSSQQNKKLYE
GATAETRTLFEKAAERFTKLVADMKSSAEVMRQDLEATRAQLQRGIFELPVDTAESTAKM
RRVIVEQIDALAELNKIVARHGQQMDQIQTVTAPPIRESVAPRASTARYEPPAPRPELPS
ASGGWLDELLNRTSAPSSAPSIDPAPPASSDSDADALDAIDALSATIPDGINHQPFADFW
DRRRRDESVKAPRTLYTLDGQRKFDDVRRRYRAEANFREAVDRYVTEFERLLDEVSRDQG
GSELARAYLVSDTGKVYTVLAHAAGRLG
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacccgacgaagttgaaagacccgacggaagcggcactctccgcgatccag
gatgctctcgatttacgcgacgggaagggcgctgatgcgcctgccgaacctgcgccggtc
gcagtctctccgcatccgagcgctgcgccaccagttgaacatccgggcgacatcaaacgc
acatcggacgttgcgcctccgcgccgcgccgccgccaacgacgaccgacaatccgtaggt
gcgattttgcaagcgctgcaggaaaagccctcgcggcgtccattcgttctcgccgccatc
gcgtcactcgcatgggttgcattcgggggatacgtcagttggagcagcggcatcacggcg
aacacgccgatgctgctcgtcgccggcgcagcgattttgctgcccgtcctgatgttcttc
gccatcgcttacatgatcatccgcgcttacgagctgcgcatcgcatcgcgctcgatgacg
caggtcgcattgcgtctcgccgagccggaaacactcgccggcgagtccatcaataacatc
ggccaggccgtgcgccgcgaagtcaccgcgatgagcgatggcgtcgaacgcgcgctctcg
cgagccagcgaactcgaatcgctggtgcataaggaagtcggcgcgctcgagcgttcttac
aacgacaacgagacccgcattcgcggcctcatcgaagatctctccagccagcgcgccgca
ttggcagggcaggcagatcagatccgctccgccatcggcagcgtgcagatgagcctcgcg
caggagctcggctcggtcagcgaacaggtctcgaccagcgtcaacgaagccgcgcagcgc
atcacgcgctcgctcgccgagaagggcgaaagcatcacgacggtgctcggccgcgccggc
gactcgatgatcgacgctatcggcgatcgtggcgccgaccttctcgaccagctcaaccgc
accagcgacgaagtcagccgcacgctcgatgcggcgaattcgcgtctcgtcgccgcactg
aacttcaagaccgacgaactcaccgaccgcattgtcgatatctcgggtgaactctcgcag
acactctcggcgcgcctcgatcgcatcgcggacggtctgcaggagaagacgacgggtctc
gccgacacgctggtcaagcgcaccgaaaccgccggcaccgacctcacgcgcctcaccaac
gaactcacgtccggcctcggcaagcgctccgaagaggttgtcgccaagctcatcgagacc
ggcagccagatggcggagacgctcgtcacgcgcggcgacgaggtcaaccagacgatccgt
tcgagcggcgactcgctcgcgctcgacctgtcgctgcgcggcagcgatctcgtcaacaag
ctggaagaagccggcaaccgcatcaccgacacgatcgtcatccgcagcaaccagacgacc
gagaccttcgagcgtaaggccgacgaagtcgcctcgctcatctcggcgcgctcgaacacg
atccaggagacgatggcgcagcgcctcgctgcgttcgaagacgtcgtcacccgcgagggc
accgcattggccgaccgtctcggccacgacgccggcaatctcggcgagcgcatctcgcgc
acgctcggcgaactcgatcacacgatcacgggacgcggcagcgaactcatcgatcgcatc
agccagcgctcggtcgagtatcacgaagccgtccgcaacaacgtcgacatcttcgagaac
cgcacggcggcacgcctcaccgaggcgacgatcgcggtgcacgatagcctttcgggtttc
gagagccgcagccaagagcgccttgccaacatcacgtcagtgctcgccgccaacctcgac
gctttcgatacgcgcgccgacgagcgcctcacgcaggtgagtggtgtcatgagcgccaac
ctcggttcgttcgagcagcgcgccgaagcgcgcgcggccgagatcgccgccgcgatgaag
gaaaacctcgatcacttcgagcggaactccgcttcgcacatggaccgcatcgccgacgtg
atgcgcgagcatggcgcggacctcgcgcagaaccttgatggccgtgtccttcaggtcgaa
tccacgctcgacggacgcacccgtgcgctcgacgacctgctgcagacgcgcgttgccgag
atcggccgcacgctgatcgagcgcagcgacaacatggtcggctcgctcgaagagcgcgtc
ggcgccgttgccaacgcgatcgagcagcacggctcgcgcttggtcggtcaaatcgagcac
cgcgcaatcgaagtcgacaaagccttcaacaatcgcgcggtcgaactctcgaccgggctc
gacagccgcatcacgcgcttccaagagcttctcgtcgatcgcgtcgagatcgtctcgagc
cagatcgaggcgcgcggcgctgccgccgccaacgtcatcgcgggccgcgtcgatcagctc
aaccaggccgtcaaaacgtcgaccggcgaagccgaacgcgctttgacgaccgtgacagca
tcgagcgccgacctcatccgcaccagcgcgcaggaagcgcagcgcacgctcgtgtcgctc
tcgtcatcgaccgccgaagcgatccgctccggcgcgcaggaagctgcgcgcaccctcgaa
ggcacggccgcgcagagcgttgccggcattcgcggcgcgaccgtcgatgcaggccgctcg
atcgaagtcttggctgcgacaacggccgatgtcatgcgcaccggcacccgcgacgccgaa
tccgcgctcgacgctgcgatccgcgcggctgccgagcagattcgcggcgaagccgccaac
gccgagcgcgtgctcgccgccgccgcgacgcagacgaccgacgccctcggcgccagcgcc
gaagccgccgagcatcgcgtccacgcgctgactgccaatctcaccgaggctttgcgcctc
ggcacgaccgacaccgagcgccgcatggagtcgcttgcgatcggcatcgcgcaaaccgtc
ggtacgcgctccgacgaagccgaacgccgcatggagatgcttgccgcatccgtgcagcaa
ctgctcgggtccggcgtcagcgacgcggaacgccgcatgacatcggtggcggagcagatt
tcctccgtcgtcggcaatgagacgcaggaagccgagcgccgcatcacggggctggtctcg
ctcctctccgatcgtctcggcgttggcacgcaggatgccgaaacgcgccttcacgcgctg
aactcgctgatcggcgacaccctcggcagcggcacgctcgatgcagaaatccgcatgcag
acgctgctcaacacattccaggaaacactcggctccggcacgatggatgccgagcgccgt
ctctcgacgctcgcttcgacgcttgccgaacgcatcggcaccggcgcgcatgacgccgag
atgcggctgcgcacgctctcggtgcacatcccggaaacgctcgacaactcgacgacggac
atcgagcgccgcctcgaaacgttggccaacacggccgcgaccacactccgctccggcagc
gacgacttcgagcgccgcctctccggcatctcggccagcacgatcgacgccgtagcggca
agcgccaacgaggcgcagcgcctgctcggcacggtcgcgtcgtcaagcgcgaatgcgatc
cgcaccagcgcgcaggacgccgagcgttcgctctcgacggttgccgccggcatccagaag
ttcgttacgcagaacacggacgaggtcgagcgcacgctgcaaggcgtcagcgccgaagtc
gtccgcagcctcagtggcaaggccgaggagctgaattcgacgctcggccaacgcagcgag
cagctcacccgcattctcgacgagaagggcagtgccttcctcaacgcgctagatacgacc
gcgaagtcgatcacgggcgacatgactcgcatcgccgatacggcagtggcttcgctcgag
agccgccaggccgctcttgcgggcgaggtatcgcgcgcgaccgacgaagcgctcaccgcg
atggaccagaaggcgacgggtcttgcccgcgccatcgcgcagaactcggaagaaatcgtc
cgcctcatcacgcaggccggctcgaacgcatcgggctcggtcagccgcgttctgtcggac
ctcgaaaccgcgggccgcgcggctgtcgagaagtcgcaggcgacgtcgaccgccgccgtc
tccgaaatgttggagacgcacaccacgctgcgcaacgacacccagtcgctgctcgagcgg
ctgcgcgaagcgaacacgctcctcaaggacgtgctcaccaatgcgaccgaaaacctcggt
actatcgagggcacactgtcgaaccgcgtgaaggaattcgttgccgcactcaccgatgtc
ggcgaacgtagcggcacggccagtagcgacgtcgaacgccaggtcaaatcgttccagtcg
gcaacgagcggcacgctcgagcagatcacagcgatggcggcgcgcttcgaagaacacggt
ggtgcactcaccggcgccgttcgcacgctggaagaaaatcaccgcaagtccgaagcggcg
ctgtccgaacgccacaaggcgctcgaaggcatcgtcggcgccgttcagaacaaggcggag
tcgctcgacgagcgcttcaatcgcttctcgacgctgctacaggatacgctcaacggcgcc
gagacccgcgctcgcgagatcgcgcgcctcgtcgccgatgcaagcaccgaaggctcgcgc
gcgatcacctcgcaatacgagcagatccgcaacgtcaccgacgaagagcgcaagcgcacg
caggaagcgatgcgcgctctgtacgaaacctcgtcccagcagaacaagaagctctacgag
ggtgcgacggcagaaacccgcacgttgttcgagaaagccgctgagcgttttaccaagctc
gtcgctgacatgaagtcctcagccgaggttatgcggcaggatcttgaagcaacgcgtgcg
cagctccagcgcggcatcttcgagcttccggtcgacacggccgagagcacggcgaagatg
cgacgcgtcatcgtcgagcagatcgacgcgctcgccgagctcaacaagatcgtcgcgcgc
cacggccagcagatggaccaaatccagaccgtcacggcgccgccgatccgcgagtcggtt
gcgccgcgcgcaagcacggctcgctacgagccgccggcaccgcgtcccgaactcccgtcg
gcctccggcggttggctcgacgagttgctaaaccgcacgtcggcgccgtcttcggcaccg
tcgatcgatccggcgcctccggcgtcgtccgacagcgacgcggatgcgctcgacgcgatc
gatgcactctccgcaacgatcccggatggcatcaaccatcagccgttcgcggacttctgg
gaccgccgccgccgcgacgaaagtgtcaaggcgccgcgcacgctctacacgctcgatggt
cagcgcaagttcgatgacgtgcgtcgccgctaccgcgccgaggcgaacttccgcgaagcc
gtcgaccgctacgtgaccgagttcgagcgcctgctcgacgaagtttcgcgcgatcagggt
ggctcggaactcgctcgcgcctatctcgtgtcggataccggcaaggtctacaccgtgctc
gcgcacgcggccggccggctcggctaa
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