Variibacter gotjawalensis: GJW-30_1_02376
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Entry
GJW-30_1_02376 CDS
T05320
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vgo03021
]
GJW-30_1_02376
03009 Ribosome biogenesis [BR:
vgo03009
]
GJW-30_1_02376
Transcription machinery [BR:
vgo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GJW-30_1_02376
Ribosome biogenesis [BR:
vgo03009
]
Prokaryotic type
rRNA transcription factors
GJW-30_1_02376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
KH_1
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
BAT59841
UniProt:
A0A0S3PV54
LinkDB
All DBs
Position
2442254..2443852
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AA seq
532 aa
AA seq
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MAVSANRLELLQIADAVAREKSIDKQIVIEAMEDAIAKAARSRYGAETDVHANIDTKSGE
LRLSRHMLVVEAVENSSNQISVEDARRRNPAAQVGDTIADALPPLEYGRIAAQSAKQVIV
QKVREAERDRQYDEYKDRIHDIVNGTVKRVEYGNVVVDLGRGEAVVRRDELLPRETFRNG
DRIRAFIFDVRREPRGPQIFLSRTHPMFMQKLFAQEVPEIYDGIVEIRSVARDPGSRAKI
AVVSRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSQDIATFVVNALAPAEVAKV
VLDEERERIEVVVPDQQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRNAEFELRT
KLFMDSLDVDETVAQLLAAEGFTSVEELAMVDQREIAGIEGFDEELAGALQGRANEFLNQ
IEQENDDKRKALGVDDALKEIPGITTKMLVALGENEVKTIEDLAGCATDDLAGWTERKNG
ENVREAGYLDGFELTRDECEGIVMQARLKAGWITEADLAKPAEEQAEEPAEA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagcgccaaccggctggaactgctgcagatcgcagacgcggtcgcccgcgag
aagtcgatcgacaagcagatcgtcatcgaggcgatggaagatgccatcgcgaaagccgcg
cgctcgcgctacggcgccgagaccgacgtgcacgccaacatcgatacgaagagcggcgag
ctccgcctctcgcgccacatgctggtcgtcgaggcggtcgaaaactcctcgaaccagatc
agcgtcgaagacgcgcgccgccgtaacccggccgcgcaagtcggcgacaccatcgcggac
gcgttgccgccgctcgaatacggccgtatcgccgcgcagtcggcgaagcaggtgatcgtg
cagaaggtgcgcgaagccgagcgtgatcgtcagtacgacgagtacaaggaccgcatccac
gacatcgtcaacggcaccgtgaagcgcgtcgaatacggcaacgtcgtcgtcgatctcggt
cgcggcgaagctgtcgtgcgccgcgacgaacttctcccgcgcgagacgttccgcaacggc
gaccgcatccgcgccttcatcttcgacgtgcgccgcgagccgcgtggcccgcagatcttt
ctctcgcgcacgcatccgatgttcatgcagaagctgttcgcgcaggaagtgccggaaatt
tatgacggcatcgtcgagatccgttcggtcgctcgcgacccgggctcgcgcgccaagatc
gccgtcgtttcgcgcgattcgtcggtcgatccggtcggcgcctgcgtcggtatgcgcggt
tcgcgcgtgcaggccgtggtgaacgaactgcagggcgagaagatcgacatcattccgtgg
tcgcaggacattgcgaccttcgtcgtcaacgcattggccccggccgaagtcgccaaagtc
gtgctcgacgaagagcgtgagcgtatcgaagtggtggtgccggatcagcagctgtcgctc
gcgatcggccgccgtggccagaacgtccgtctcgcctcgcagctgacaggctgggatatc
gacatcctcaccgagcaggaagagtcggagcgccgcaacgccgaattcgaattgcgcacc
aagctgttcatggattcgctcgacgtcgacgagaccgtcgcgcagctgctcgctgccgaa
ggcttcacgtccgtggaagaactcgcgatggtcgaccagcgcgaaatcgccggcatcgaa
ggcttcgacgaagaactcgccggcgcactgcaaggccgcgccaacgagttcctcaatcag
atcgagcaggaaaacgatgacaagcgcaaagcgcttggcgtcgacgatgcgctcaaggaa
atcccgggcatcaccacgaagatgctggttgctctcggcgagaacgaggtcaagacgatc
gaggatctcgccggctgcgcgaccgacgatctcgcgggttggaccgagcgcaagaacggc
gagaatgttcgcgaagcgggctatctcgacggcttcgagctgacgcgtgacgagtgtgaa
ggcatcgtgatgcaggcgcgcctcaaggcgggctggatcaccgaggcagatctcgccaag
cctgccgaagagcaggctgaggagccggcggaggcctaa
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