Variibacter gotjawalensis: GJW-30_1_02380
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Entry
GJW-30_1_02380 CDS
T05320
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgo03016
]
GJW-30_1_02380 (truB)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GJW-30_1_02380 (truB)
Transfer RNA biogenesis [BR:
vgo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJW-30_1_02380 (truB)
Prokaryotic type
GJW-30_1_02380 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAT59845
UniProt:
A0A0S3PV47
LinkDB
All DBs
Position
2447902..2448867
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AA seq
321 aa
AA seq
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MTEAVQIPTPPPRQQKRIKRDIDGWLILDKPVGMTSTHAVAVVKRAFQAKKAGHAGTLDP
LASGILPIALGEATKTVPYVMDGRKAYRFTVRWGVETDTDDAEGREIATADLRPDRAAIE
AILPKFTGALMQTPPKFSALKIQGQRAYDLARDGEEVVLEPRPIEVKRLTLTAMPDADNA
EFEAECGKGTYVRALARDIGRALGTRGHVVALRRTAVGPFIEQRAVVVDQLPQTEEGAAP
TLSTLQPVVAALVDVPSVMVSRADASRLARGQAVIMRGRDAPIVGGWLAVMAEGRLVALA
EAIEGELCPRRIFRLNGPPNA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccgttcagattccgacaccgccgccgcgtcagcaaaagcgcatcaagcgc
gatatcgatggctggctcattctcgacaagcccgtcggcatgacgtcgacgcacgcggtc
gccgtcgtcaaacgcgcgttccaggcgaagaaagccggccacgccggcacgctcgatccg
ctcgcctccggcattctgccgatcgcgctcggcgaagcgacgaagactgttccgtatgtg
atggatggtcgcaaggcgtatcgcttcacggtgcgctggggcgtcgagacagatacggac
gatgccgagggccgcgagatcgcgaccgcggatctgcgtccggaccgcgccgcgatcgaa
gctatcctgccgaaattcaccggcgcgctgatgcagacgccgccgaaattctccgcgctc
aagatccagggccagcgcgcctacgatcttgcgcgcgatggtgaagaggtggtgctcgag
ccgcgcccgatcgaggtgaagcgcctcacgctcaccgcgatgccggatgctgacaacgcc
gagttcgaagccgaatgcgggaagggtacttacgtccgcgctctcgcgcgcgacatcggc
cgcgcactcggtacgcgcggtcacgtcgttgcgctgcgccgcacggctgtcggtcctttc
atcgagcagcgcgccgtcgttgtcgatcaactgccgcaaaccgaagagggcgccgcgccg
acattgtcgacgctgcagccggtcgtagcagcactcgtcgacgtgccgagtgtgatggtg
agccgcgccgacgcatctcgcctcgcgcgcggccaagccgtcatcatgcgcggtcgtgat
gcgccgatcgtcggcggctggctcgccgtcatggcggaaggccgtctcgtcgcgctggcc
gaggcgatcgagggcgaactttgcccgcgccggatcttccgcctcaacggcccgccgaac
gcttga
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