Variibacter gotjawalensis: GJW-30_1_02382
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Entry
GJW-30_1_02382 CDS
T05320
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJW-30_1_02382 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgo03019
]
GJW-30_1_02382 (pnp)
03016 Transfer RNA biogenesis [BR:
vgo03016
]
GJW-30_1_02382 (pnp)
Enzymes [BR:
vgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GJW-30_1_02382 (pnp)
Messenger RNA biogenesis [BR:
vgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GJW-30_1_02382 (pnp)
Transfer RNA biogenesis [BR:
vgo03016
]
Prokaryotic type
tRNA degradation factors
GJW-30_1_02382 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
aRib
DUF7357
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BAT59847
UniProt:
A0A0S3PV74
LinkDB
All DBs
Position
2449749..2451908
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AA seq
719 aa
AA seq
DB search
MFNINKVSLDWGGRQLTLETGKVARQADGAVMVTYGDTTVLCTVVSAKNAKEGVDFLPLT
CNYFEKFYAAGRIPGGFFKREGRPTERETLISRLIDRPIRPLFADGYRCDTQVICTVLSH
DLENDPDIVAMVGASAALTLSGVPFMGPIGAARVAFVDNEYVLNPQLDEANDSALDLVVA
GTTDAVLMVESEAKELSEEIMLGAVMFGHRHFQPVINAIIELAEKAAQEPRDFTAPDFSD
IEKEMLGVVDADLRKAYAIPAKMERHAAVDAAKAKAMAHFNPEGQEPRYDKLKLGKVFKG
LEAKVVRWNILDTGKRIDGRDTKTVRQIISEVGVLPRTHGSALFTRGETQALVVTTLGTG
EDEQFIDALPGTYKEHFMLHYNFPPFSVGETGRLGSPGRREVGHGKLAWRAIHPVLPPKH
EFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLRRPIAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEKGVTSLQMDIKIAGITEEIMKVALSQAKDGREHILGEMAN
ALTTARSELGEHAPRIEVLQIPVDKIREVIGTGGKVIREIVEKTGAKINVEDDGTVKVAS
ANGDSIKAAINWIKSIASDPEVGTIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAARV
QKVSDVVKEGDKVKVKLLGLDDRGKVRLSMKVVDQATGEDLEAKQKAEGQQQPRQAAGE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatcaacaaagtgagcctggattggggtgggcgtcagctgaccctcgagacc
ggcaaagtcgcgcgccaggccgatggcgccgttatggtgacttacggtgacaccacggtg
ctctgcacggtcgtctccgccaagaacgcgaaggaaggcgtcgacttcctgccgctcacc
tgtaactacttcgagaagttttacgccgccggccgcattccgggtggcttcttcaagcgt
gaaggccgcccgaccgagcgtgagacgctcatctcgcgcctgatcgaccgcccgatccgt
ccgctgttcgccgacggttatcgttgcgacacgcaggtcatctgcacggtgctctcgcac
gatctcgaaaacgatccggacatcgtcgcgatggtcggcgcgtccgccgcgctgacgctc
tcgggcgttccgttcatgggtccgatcggcgctgcgcgcgttgccttcgtcgacaacgaa
tacgtgctcaacccgcagctcgacgaagctaacgacagcgcgctcgatctcgtcgtcgcc
ggcaccaccgacgccgtgctgatggttgaatcggaagccaaggagctgtccgaagagatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtgatcaatgcgatcatc
gagcttgccgagaaggccgcgcaggagccgcgcgacttcacggctccggacttctcggac
atcgagaaggaaatgctcggcgtcgtcgatgcggacctccgcaaggcttacgcgatcccg
gcgaagatggagcgtcacgctgccgtcgatgccgccaaggcaaaggccatggcgcatttc
aatccggaaggccaagagccgcgctacgacaagctcaaactcggcaaggtcttcaagggc
ctcgaagccaaggtcgttcgctggaacatcctcgacaccggcaagcgcatcgacggtcgc
gacaccaagacggtgcgtcagatcatctccgaagtcggagtgctcccgcgcacccacggc
tcggcgctgttcacacgcggtgagacgcaggcgttggtcgtcaccacgctcggcaccggc
gaagacgagcagttcatcgacgcgctgccgggaacgtacaaggagcacttcatgctccac
tacaacttcccgcccttctcggtcggtgagacgggccgcctcggttcgcccggccgccgc
gaagtcggtcacggcaagctcgcttggcgcgcgatccatccggtcctgccgccgaagcac
gaattcccgtacacgctccgcgtcgtctccgagatcaccgagtcgaacggctcgtcctcg
atggcgacggtctgcggaacctcgctggcattgatggacgcgggcgttccgctgcgccgt
ccgatcgccggcatcgcgatgggcctcatcctcgaaggcgagcgcttcgcggttctctcc
gacatcctcggcgacgaagatcatctcggcgacatggacttcaaggtggctggcaccgag
aagggcgtgacctcgctgcagatggacatcaagatcgcgggcatcaccgaagagatcatg
aaggtggcgctctcgcaggcgaaggatgggcgcgagcacatcctcggtgagatggcgaat
gcgctgaccacggcacgctcggagctcggcgaacacgcgccgcgcatcgaagtgctgcag
atcccggtcgacaagatccgtgaagtcatcggcaccggcggcaaggtgatccgcgagatc
gtcgaaaagaccggcgccaagatcaacgtcgaggacgacggcaccgtgaaggtggcgtcc
gccaacggcgactcgatcaaggcagccatcaactggatcaagtcgatcgcgtccgatccg
gaagtcggcacgatctacgaaggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aattttttcggcgccaaggacggtctcgtccacatcagccagcttgctgcagcgcgcgtc
cagaaggttagcgatgtcgtcaaggaaggcgacaaggtcaaggtgaagctgctcggtctc
gacgaccgcggcaaggttcgcctctccatgaaggtcgtcgatcaggcgaccggcgaagac
ctcgaagccaagcagaaggccgaaggtcagcagcagccgcgtcaggctgccggcgagtaa
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