Variibacter gotjawalensis: GJW-30_1_02627
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Entry
GJW-30_1_02627 CDS
T05320
Symbol
rhaS
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vgo03000
]
GJW-30_1_02627 (rhaS)
Transcription factors [BR:
vgo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GJW-30_1_02627 (rhaS)
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
DegT_DnrJ_EryC1
Cupin_6
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
BAT60092
UniProt:
A0A0S3PW19
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All DBs
Position
2710443..2711330
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AA seq
295 aa
AA seq
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MSAQALPLFHLYGDPPDDHAFDFIHVETLFSRSAVNDWVILAHRHRNLFQVMVIEQGGGE
MTYESATLPLEGPSINLVPPTIVHGYRFRPETTSGYVVSFTEDVVQSQGERQNDVLGALR
RLAQDPVLLLDDNAREKLSGLCRAMLDEHLLARPGYRLAMRAHLALFAVEIVRSAQSRQR
SGMVTLRPTDATVDTLRALIEENFRSERLVAFYADKLAMTPDRLNDHVKRTAGVTAGHLI
RQRVLTEAKRQLVFTTLAIHDIAYQLAFSDPSHFTRFFRKQTGTTPQAFRESRGG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcaagcgctgccgctgtttcatctctacggcgatccgccggacgatcacgcg
ttcgacttcatccatgtcgaaacgctgttctcccgctcggccgtcaacgactgggtgatc
ctcgcgcaccggcatcgcaatctgttccaggtgatggtgatcgagcagggcggcggcgag
atgacttacgagtccgcgacgttgccgctcgaagggccgagcatcaacctcgtgccgccg
accatcgtgcacggctatcgcttccgcccggagacgacgtccggctacgtcgtatccttc
accgaagacgtggtgcagagccagggcgagcggcagaacgatgtgctcggcgcgctgcga
cgtctcgcacaagacccggtcctgctgctcgacgacaacgcgcgcgaaaagctctccgga
ttgtgccgcgcgatgctcgacgagcatctcctcgcgcgccccggctatcgccttgcgatg
cgcgctcatctggcgctcttcgccgtcgagatcgtgcgctccgcgcaaagccgccaacgc
tccggcatggtgacgttgcgcccgaccgacgccaccgtcgacaccttgcgcgctctgatc
gaagaaaatttccgcagcgagcgcctcgtcgcattctatgccgacaagctcgcgatgacg
ccggaccgcctcaacgatcacgtcaagcgcaccgctggcgtcaccgccgggcatctcatt
cgccagcgcgtactcaccgaggcgaaacgccagctcgtcttcacgacgctcgcgatccac
gacatcgcgtatcagctcgccttctcggacccgtcgcacttcacgcgcttcttccgcaag
cagaccggcacgacgccgcaggcgtttcgcgaaagccgtggcggctaa
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