Variibacter gotjawalensis: GJW-30_1_03098
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Entry
GJW-30_1_03098 CDS
T05320
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_03098
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJW-30_1_03098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_30
AAA_16
AAA
SLFN-g3_helicase
RecA
Lon_C
AAA_24
GvpD_bR2
PAXNEB
nSTAND3
MCM
DUF7125
AAA_5
MeaB
NACHT
NTPase_1
NPHP3_N
DUF7129
CobU
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAT60552
UniProt:
A0A0S3PX86
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Position
3178135..3179571
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AA seq
478 aa
AA seq
DB search
MAARRNPTFICQNCGAVTNRWQGKCESCGEWNTIVEETSALDRPVSGRPSRKGRVFALEP
LTGETPNAPRLSSGIAELDRVTGGGFVRGSVLLLGGDPGIGKSTLLIQASAALARSGHRS
VYVSGEEAVAQVRLRAERLGLASAPVELASETSVEDIIATLSEGQVPKLIIIDSIQTMWT
DTVESAPGTVTQVRSSAQALIRFAKRCGAAVILVGHVTKDGQIAGPRVVEHMVDAVLSFE
GEGSHQFRILRALKNRFGPTDEIGVFEMTGIGLREVANPSELFLSERNLGAPGTAVFAGM
EGTRPVLVEMQALVAPSSLGTPRRAVVGWDPSRLSMLIAVLDAHCGVRLGQHDVYLNVAG
GLRINEPAADLAAAAALVSSLAESPLPSEAVYFGEISLSGALRPVSHRPSRLREAGKLGF
SAAFAPESARADPDSGGTVRVNVVSALHDLVATIAAASARNPKRSAPRNDLRKPGQEG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgccgcaatccgaccttcatctgtcaaaactgtggagcggtgacgaaccgc
tggcagggcaagtgcgaaagctgcggcgagtggaacaccatcgtcgaggagacgagcgcg
ctggatcgtccggtctccggacggccgagccgtaagggccgcgtcttcgcactcgagccg
ctgaccggcgagacaccaaacgccccgcgcctctcctccggtatcgcggaactcgatcgc
gtcaccggcggcggtttcgtgcgcggctcggtgctgctgctcggcggcgacccgggcatt
ggaaaatcgacgctgctgatacaagcatccgccgctctcgcgcggtctggtcatcgttcc
gtttatgtctcgggtgaggaagcggtggcgcaagtacgcctgcgtgccgagcgtcttggc
cttgcatcggcgccggtcgaactcgcgtccgagacgtcggtcgaagacatcatcgcgacg
ctctcagaaggccaagtcccgaagcttatcatcatcgactcgatccagacgatgtggacc
gacacagtcgagtcggcgcccggcacagttacgcaggtgcgcagctctgcgcaggcgctg
atccgcttcgccaaacgctgcggcgctgctgtcatcctggtcggccacgtcaccaaggat
ggtcagatcgcaggcccccgcgtcgtcgagcacatggtcgacgccgtcctttccttcgag
ggtgaaggctcgcaccagttccgcatcctgcgtgcgctgaaaaaccgcttcggcccgacc
gacgaaatcggcgtcttcgagatgaccggcatcggcctccgcgaagtcgccaacccgtcc
gagctgttcctctccgagcgcaatctcggggctcccggtactgccgtattcgccggcatg
gagggcacccggccggtcctcgtcgaaatgcaggcgctcgtcgccccgagcagcctcggc
acgccccgccgcgcggtcgtcggatgggatcctagtcgcctctcgatgcttattgcggtg
ctggatgcccattgcggcgtccgcctcggccagcacgacgtctacctcaatgtcgccggt
gggctccggatcaacgaaccggccgccgatctcgcggccgccgctgctctcgtctcgtcc
ctcgccgagtctccgctaccgtcggaggcggtctatttcggcgaaatctcgctttccggc
gcgctgcgcccggtttcgcatcggccgtcccgcctgcgcgaagctgggaaactcggcttt
tcggccgcttttgccccggaaagcgcccgcgcagaccccgactcaggcggtaccgtccgc
gttaacgttgtctcggcgcttcacgatctcgtcgccacgattgcggcggcatctgctcgc
aacccgaaacgctcggctccccgcaatgacctgcggaaacctggacaagaaggatga
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