Variibacter gotjawalensis: GJW-30_1_03121
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Entry
GJW-30_1_03121 CDS
T05320
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00260
Glycine, serine and threonine metabolism
vgo00460
Cyanoamino acid metabolism
vgo00630
Glyoxylate and dicarboxylate metabolism
vgo00670
One carbon pool by folate
vgo00680
Methane metabolism
vgo01100
Metabolic pathways
vgo01110
Biosynthesis of secondary metabolites
vgo01120
Microbial metabolism in diverse environments
vgo01200
Carbon metabolism
vgo01230
Biosynthesis of amino acids
vgo01240
Biosynthesis of cofactors
vgo04981
Folate transport and metabolism
Module
vgo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GJW-30_1_03121 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
GJW-30_1_03121 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GJW-30_1_03121 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GJW-30_1_03121 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GJW-30_1_03121 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GJW-30_1_03121 (glyA1)
Enzymes [BR:
vgo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GJW-30_1_03121 (glyA1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAT60575
UniProt:
A0A0S3PXD2
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All DBs
Position
complement(3201122..3202432)
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AA seq
436 aa
AA seq
DB search
MTASPSSAQATKASDFFTASLADADPAIFQMIGKELGRQRDEIELIASENIVSRAVLEAQ
GSVLTNKYAEGYPGKRYYGGCQYVDEVETLAIERVTKLFGAKFANVQPHSGASANLAAFM
AVMQPGDTFMGLNLAAGGHLTHGSPVNYSGKWFNIVPYSVRQDDQRIDYDEVARLATEHR
PKLIVAGGSAYPRTIDFRRFREIADSVGARLMVDMAHFAGLVAGGIHPNPIEHAHLVTST
THKTLRGPRGGFVLTNEEDLAKRVNSAVFPGTQGGPLMHVIAAKAVAFGEALQPSFRAYA
KAIVDNAKALAETLKSRGFDIVSGGTDTHLMLVDLRPKNLTGKVSEEALGRAHITCNKNG
IPFDPAKPAVTSGIRLGTPAGTTRGFGIAEFKQIGDLITEVLDVLSQKGTTEDSLVEAAV
REKVKTLVGRFPIYNG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttctccgtcgtccgcgcaagcgacgaaagccagcgattttttcaccgccagt
ttggccgacgccgatccggctattttccagatgatcggcaaggagctgggccgccagcgc
gacgagatcgaattgatcgcgtcggaaaacatcgtcagccgggccgtgctcgaagcacaa
ggctcggtgctgacgaacaagtatgcggaaggctacccgggtaagcgctactacggcggt
tgccagtatgtcgacgaggtcgagacgctcgcgatcgagcgcgtgacgaagctcttcggc
gccaagtttgcgaacgtgcagccgcattccggtgcgtcggctaacctcgcggcgttcatg
gccgtgatgcagcccggcgacacgttcatggggctcaatctcgccgccggcggacatctc
acgcatggctcgccggtgaactattcgggcaagtggttcaacatcgtgccgtacagcgtg
cggcaggacgatcaacgcatcgattatgatgaagtcgcgcgcctcgcgaccgagcatcgc
ccgaagctgatcgttgctggtggctctgcttatccgcgcacgatcgatttccgccggttc
cgtgagattgcggattccgttggcgcgcgtctgatggtcgacatggcgcattttgcgggt
ttggtcgcgggcggcattcatccgaatccgatcgagcatgcgcatctcgtcacctcgacg
acgcacaagacgttgcgcggtccgcgcggcggcttcgtgctgaccaacgaggaagacctc
gcaaagcgcgtcaattcggcggtgttcccgggcacgcaaggcggcccgctgatgcatgtg
atcgccgcgaaggccgttgcgttcggcgaagcgctgcagccgtcgttccgcgcttatgcg
aaggctatcgtcgacaacgcgaaagcgctggccgagacgctcaaatcgcgcggtttcgac
atcgtgtcgggcggcaccgacacgcatctcatgctggtcgatctgcgcccgaagaatctc
accggcaaagtttccgaggaggcgctcggccgcgctcacatcacctgcaataagaacggc
atcccgttcgatcccgcgaagccggccgtaacgtcgggcattcgccttggcacgccggcc
ggaacgacgcgcggcttcggcatcgcggagttcaagcaaatcggcgatctgatcaccgaa
gtgctcgacgtgctgtcgcagaagggcacgaccgaggactcgctggttgaggccgcagtg
cgcgagaaggtgaagaccctggtcggacgcttcccgatctataacggctaa
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