Variibacter gotjawalensis: GJW-30_1_03140
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Entry
GJW-30_1_03140 CDS
T05320
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgo03032
]
GJW-30_1_03140 (hupA)
03036 Chromosome and associated proteins [BR:
vgo03036
]
GJW-30_1_03140 (hupA)
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_03140 (hupA)
DNA replication proteins [BR:
vgo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GJW-30_1_03140 (hupA)
Chromosome and associated proteins [BR:
vgo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GJW-30_1_03140 (hupA)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GJW-30_1_03140 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAT60593
UniProt:
A0A0S3PXD1
LinkDB
All DBs
Position
3219481..3219789
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AA seq
102 aa
AA seq
DB search
MAAAAAKSATPATVTLKHLAAKLAEQHELSKKAAEAILADEISLIVKHLKKGDRIRIGGL
GILQVRKRAARMGRNPATGEQIKIKASKKVAFRASKELKESI
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcagcagcaaagtcggcgaccccggcaaccgtcacgcttaagcacctggca
gcgaaactcgctgagcagcacgaactgtcgaagaaggccgcggaggccatcctcgccgac
gaaatcagcctgatcgtcaagcacctcaagaagggcgaccggatccgcatcggcggtctt
ggcatcctccaggtccgcaagcgcgccgcccgcatgggccgcaacccggcgaccggcgaa
cagatcaagatcaaggcttccaaaaaggtcgcgttccgcgcctccaaggaactcaaagag
tcgatctaa
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