Variibacter gotjawalensis: GJW-30_1_03306
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Entry
GJW-30_1_03306 CDS
T05320
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vgo03032
]
GJW-30_1_03306 (topA)
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_03306 (topA)
Enzymes [BR:
vgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GJW-30_1_03306 (topA)
DNA replication proteins [BR:
vgo03032
]
Prokaryotic type
DNA Topoisomerases
GJW-30_1_03306 (topA)
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJW-30_1_03306 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAT60756
UniProt:
A0A0S3PY00
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All DBs
Position
3386849..3389530
Genome browser
AA seq
893 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGSGYEVMASFGHVRDLPAKDGSVDPEKDFAMLWEVDAKSNK
RLSDIANAVKNADGLILATDPDREGEAISWHVLEVLRQKKALKSQPVERVVFNAITKQSV
TEAMKHPRQIDSALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EMDIEKFIAQEFWSLVATLATPRNDTFEARLVGADGKKIQRLDIGKGAEAQAFKRDLESA
QFRVASVEAKPGRRNPPPPFTTSTLQQEASRKLGLAPAQTMRVAQRLYEGTDIGGETVGL
ITYMRTDGVQMADEAIQQARSVIGQDYGAKYVPSAARQYQTKAKNAQEAHEAIRPTDLSR
RPKQVAKYLDAEQAKVYELVWLRAMASQMESAELERTTVEIEAKVGARKLDLRATGTVIQ
FDGFLALYQEGEDDAADDDESKRLPAMSSGEALAKREIKATQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRSYVRLDKRRLYAEDKGRLVIAFLESFFARYVEYDFTASL
EEQLDRVSNNELDWKQVLRDFWTNFTGAIDETKELRITDVLNALDEMLGPHVFPPKEDGS
DPRLCPTCGTGRLNIKLGRFGAFVGCSNYPECKYTRTFSASDEGGDSGTKILGTDPESGL
DVTLRSGRFGPYLQLGEGGDGEKPKRSSIPKGTDPQSVELEQALALLSLPREVGKHPEDG
EPIMANIGRFGPYVQHIKTYANLDKGEDVLTIGLNRAVALIADKIANPGRGRQQADPGKP
VGDHPSGGVITVKNGRYGPYVTHDGVNATLTAGKTPETITLDEAIALIDARAAAGGGKKK
KAAPKKKAAPKAKAAKADDAVDGEKPKAKAPGKKKAPVKKAAAKKPAAKKAAK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcgtcgtcgaatccccggctaaggccaagacaatcaacaagtatcttggc
tctggctacgaggtcatggcgtcgtttggccatgtccgcgacctgcccgcaaaggacggt
tccgtcgatccggagaaggacttcgccatgctctgggaggtcgacgccaagtccaacaag
cgcctcagcgatatcgccaatgcggtcaagaacgcggacggtttgattctcgcaaccgac
ccggatcgcgagggagaagccatttcgtggcacgttttggaggttttacgccaaaagaag
gcgctgaaatcacaacctgtagaacgtgtcgttttcaacgcgatcaccaagcagtcggtg
accgaagcgatgaagcatccgcgccaaatcgattcggcgctggttgatgcatacctcgcg
cgacgcgcgctcgattacctcgttggcttcacgctctcgcccgtgctctggcgcaaattg
ccgggcgcgcgctcggccggccgcgtgcagtcggtcgccttgcgtctcgtctgcgatcgc
gagatggacatcgaaaaattcatcgcgcaggaattctggtctctcgtcgcgacgctcgcg
acaccgcgcaacgacacgttcgaagcgcgcctcgtcggcgccgacggaaagaaaattcag
cgcctagacatcggcaaaggcgcagaagctcaagcgttcaagcgcgatctcgaaagcgca
cagttccgcgtcgcctccgtcgaagcaaaaccgggccggcgcaatccgccgccgccgttc
acgacctcgacgctacagcaggaagcgagccgcaagctcggcctcgcgcccgcgcagacc
atgcgcgtcgcacagcgcctctacgaaggcaccgacatcggcggcgagaccgtcggtctc
attacctatatgcgaactgacggcgtgcagatggcggacgaagccatccagcaagcccgc
agcgtgatcggccaggactacggcgcgaaatacgtgccctccgccgcgcgccagtatcag
acgaaagcgaagaacgcgcaggaagcgcacgaagcgatccgcccgaccgatctttcgcgc
cgcccgaagcaggtcgcgaaatatctcgatgccgaacaggcgaaggtctacgagctcgtc
tggttgcgtgcgatggcatcgcagatggagtcggccgaactcgaacgcacgacggtcgag
atcgaagccaaggtcggcgcgcgcaagctcgacttgcgtgctaccggcaccgtgatccaa
ttcgacggcttcctcgcgctctatcaggaaggcgaggacgacgcggccgacgacgacgag
tcgaagcgcctccccgcgatgagcagcggcgaagcgctcgcgaagcgcgagatcaaggcg
acgcagcatttcaccgagccaccgccgcgtttctccgaagcatcgctcgtcaagcgcatg
gaagaactcggcatcggccggccgtcgacctacgcgtcgatccttcaggtgctcaaagat
cgctcttacgttcgcctcgacaagcgccgcttgtacgctgaggacaaaggccgcctcgtt
atcgcgttcctcgaaagcttcttcgcgcgctacgtcgaatacgacttcacagcctcgctc
gaagagcagctcgatcgcgtgtcgaacaacgaactcgactggaagcaagtcctccgcgac
ttctggaccaacttcacgggcgcgatcgacgagacgaaagaactccgcatcaccgacgtg
ctcaacgcactcgacgagatgctggggccgcacgtcttcccgcccaaggaagacggcagc
gatccccgcctctgcccgacctgcggcaccggccgcctgaacatcaagctcggccgcttc
ggagcgttcgtcggctgctcgaattaccccgaatgcaaatacactcggactttctcggcg
agcgacgaaggcggcgactccggcaccaagatcctcggcaccgaccccgagtcgggcctg
gacgtcacgctgcgctccggccgcttcggaccgtatctgcagctcggcgaaggcggcgac
ggcgagaagccgaagcgctccagcattccgaaaggcaccgacccgcagtcggtcgaactc
gagcaggcactcgcgctgctctcactgccgcgcgaagtcggcaagcatccggaagacggc
gaaccgatcatggccaatatcggccgcttcggtccttacgtgcagcacatcaagacctac
gcgaatctcgacaagggcgaggacgtgctcaccatcggtctcaaccgcgcggtcgcgctg
atcgccgacaagatcgccaatccgggccgcggccgtcagcaggcggatcccggcaagccg
gtcggcgatcatccgagcggcggcgtcatcacggtgaagaacggccgctacggaccttac
gtcacgcacgacggcgtcaacgcgacgctgacggctggcaagacgccggagacgatcacg
ctcgatgaagccattgcgctgatcgacgcgcgcgcggcagcgggcggcggcaagaagaaa
aaagccgcaccgaagaagaaggctgcgccgaaggcgaaagccgcgaaggctgacgatgcg
gttgatggcgagaagccgaaagccaaagctccggggaagaagaaagcgccggtcaagaaa
gccgccgcgaagaagcctgccgccaagaaggccgcgaagtaa
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