Variibacter gotjawalensis: GJW-30_1_03370
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Entry
GJW-30_1_03370 CDS
T05320
Symbol
dacF_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00550
Peptidoglycan biosynthesis
vgo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJW-30_1_03370 (dacF_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vgo01002
]
GJW-30_1_03370 (dacF_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgo01011
]
GJW-30_1_03370 (dacF_2)
Enzymes [BR:
vgo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GJW-30_1_03370 (dacF_2)
Peptidases and inhibitors [BR:
vgo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GJW-30_1_03370 (dacF_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
vgo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GJW-30_1_03370 (dacF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
BAT60820
UniProt:
A0A0S3PY63
LinkDB
All DBs
Position
complement(3443040..3444470)
Genome browser
AA seq
476 aa
AA seq
DB search
MRSKKFRTGTRIAVFALAAVVAVVALGSDPADARRRHKKFRAVGYAPAYAAIVVDANTGQ
VMHDESADQRRHPASLTKIMTLYMLFEQLESGKLRLDSRLPVSSHAASMAPTKLGLRPGQ
TIEAEDAIKALVTRSANDAAAVIAEAIGGEEEDFARMMTRKARSLGMSRTVYKNASGLPD
MEQITTARDQAILGRAIQERFPRYYRYFNTRQFVYRGRPIGNHNRLLGRVEGVDGIKTGY
TRASGFNLVSSMKRGNRHIVAVVLGGRSGGARDARMRHLLEDNIVEASARRTAPRMIEVA
DNDAPAKPQRVAVAEAPRATASVPQTFAMMAPVAAPAPSVGSAEPIRPTLVKTLTVKRGP
AAQAAAPAPVAAPQRVASLGDTPIISEPRSPRALPKGEWVIQIGAFPAETQAQERLKEAR
SLASSALGRAEPFTERVTKGDTTLFRARFAGFDRDRAEAACKQLKRSEINCLAMKN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaaaaaaatttcggaccggcacgcgtatcgccgtgttcgctcttgctgctgtt
gtcgcggtcgttgccctcggatctgatccggcagatgcacgccgccgtcacaagaaattc
cgcgccgtcggctatgcacccgcttatgcagcgatcgtcgtcgacgcgaatacgggccaa
gtgatgcatgacgagagcgccgaccagcgccgtcatccagcctcgctcacgaaaatcatg
actctctatatgctgttcgagcagctggagtccggcaagctgcgactcgacagccgcctt
ccggtctcgtcgcatgccgcctcgatggcgccgacaaagctaggcctgcgcccgggccag
acgatcgaagccgaagacgcgatcaaggcgctcgtcacgcgttcggccaacgacgctgcc
gccgtgatcgccgaagcgatcggcggggaagaggaagatttcgcgcgtatgatgacgcgc
aaggcgcgctcgctcggtatgtcccgcacggtctataaaaatgcgtcgggtcttcccgac
atggagcagattacgacggcgcgcgatcaggcgatcctcggccgcgcgatccaggaacgc
ttcccgcgctactatcgctacttcaacacgcgccagttcgtgtatcgcggccgcccaatc
ggcaaccacaaccgtctgctcggccgcgtcgaaggtgtcgacggcattaagacgggttac
acgcgcgcttcgggcttcaatctcgtgtcgtcgatgaagcgaggcaatcgccacatcgtc
gccgtcgtgctcggcggacgttcgggtggcgcgcgcgatgcgcgcatgcgtcaccttctc
gaggacaatatcgtcgaggcttcggcccgccgcaccgcgccgcgcatgatcgaagttgcc
gacaacgatgcgccggcgaagccgcagcgtgtcgccgtcgcggaagcgccgcgcgcgacc
gcatcggtgccgcagactttcgccatgatggctccggttgccgcgccggctccgtcggtg
ggctcggccgagccgatccgtccgacgctggtgaagactttgacggtcaagcgcggtccg
gcggctcaagctgctgcaccggcgccggtcgctgctccgcagcgcgtcgcttcgctcggc
gatacgccgatcatcagcgagccgcgttcgccgcgtgctctgccgaaaggcgaatgggtt
attcagatcggtgcattcccggctgagacgcaggcgcaggagcgtctgaaggaagcgcgt
tcgctcgcgagcagcgctctcggccgcgccgagccgttcacggaacgcgtcacgaagggc
gacaccacgctcttccgcgcacgcttcgcgggcttcgatcgcgaccgcgctgaggctgcg
tgcaagcagctaaagcgcagcgagatcaactgcctcgcgatgaaaaactaa
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