Variibacter gotjawalensis: GJW-30_1_03394
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Entry
GJW-30_1_03394 CDS
T05320
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00450
Selenocompound metabolism
vgo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GJW-30_1_03394 (csd)
Enzymes [BR:
vgo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
GJW-30_1_03394 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
GJW-30_1_03394 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
BAT60844
UniProt:
A0A0S3PY12
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Position
complement(3465649..3466884)
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AA seq
411 aa
AA seq
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MLDKATAYDIDRIRADFPALAMQVYGKPLVYLDNAASAQKPKQVLDRITQVYTSEYANVH
RGLHYLANAATEAYEGARETVRAFLNAERLEEIIFTSNATDALNLVSASFGLDNIKEGDE
IVISIMEHHSNIVPWNFLRERKGAVIKWAPVDEQGNFLLDEFEKLLTERTKIVSITHMSN
ALGTIVPVKDVTRLAHARGIPVVIDGSQAAVHLDVDVRDIDCDFYVITGHKLYGPTGIGA
LYGKYDRLAALPPFKGGGEMIRDVFEDRVTYGDPPHRFEAGTPPIVQAAGLGAAIDYIQA
IGKERIRAHEDDVSSYARERLRELNSIRIVGDARDKGAIVSFEMKGAHPHDVATVIDRAG
VAVRAGTHCVMPLLARYGLTATCRASFGLYNTRAEADALFEALRKAQGMFA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaaggccaccgcatacgacatcgatcgcatccgcgcggatttccccgcgctg
gcgatgcaggtctatggcaagccgctcgtgtatctcgacaacgcggcctcggcgcagaag
ccgaagcaggtgctcgaccggattacgcaggtttacaccagcgaatatgccaacgtgcat
cgcgggcttcattacctcgcgaatgccgcgacggaggcttacgagggcgcgcgcgagacg
gtgagggctttcctcaatgcggagcgtctggaagagatcatcttcacgagcaacgcgacc
gatgcgctgaatctcgtatcggcgagcttcggcctcgacaacatcaaagagggcgatgag
atcgtgatctccatcatggagcatcactccaacatcgtgccgtggaatttcctgcgcgag
cgcaagggcgccgtcatcaagtgggcgccggtcgacgagcagggcaactttctgctcgac
gaattcgagaagctgctgaccgagcgcaccaagatcgtctcgatcacgcatatgtcgaac
gcgctcggcaccatcgttcccgtgaaggacgtgacgcggctagcgcatgcgcgcggcatt
ccggtcgtcatcgacggcagccaggccgccgtgcatctcgatgtcgacgtgcgcgatatc
gattgcgatttctacgtcatcaccggacacaagctttacggccccaccggcatcggcgcg
ctgtacggaaagtacgaccgtctggcggccctgccgccgttcaagggcggcggcgagatg
atccgcgacgtgttcgaggatcgcgtcacgtatggcgatccgccgcaccgcttcgaagcc
ggcacgccgccgatcgtgcaggccgcaggtctcggcgctgcaatcgactacattcaggcg
atcggcaaggagcgcatccgcgcacacgaggatgatgtctcgtcgtatgcgcgcgagcgg
ctgcgtgagctcaattcgatccgcatcgtcggcgatgcgcgcgacaagggcgctatcgtc
tcgttcgagatgaagggtgcgcatccgcatgacgtcgcgaccgtgatcgaccgcgccggc
gttgcggttcgcgcgggcacgcattgcgtgatgccgctgctggcgcgatacggattgacg
gcgacatgccgcgcctcgttcggtctttacaatacgcgcgccgaggccgatgcgctgttc
gaagcgctacgcaaagcacaaggtatgttcgcatga
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