KEGG   Variibacter gotjawalensis: GJW-30_1_03443
Entry
GJW-30_1_03443    CDS       T05320                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vgo  Variibacter gotjawalensis
Pathway
vgo00230  Purine metabolism
vgo00240  Pyrimidine metabolism
vgo01100  Metabolic pathways
vgo01232  Nucleotide metabolism
Module
vgo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
vgo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    GJW-30_1_03443 (nrdJ)
   00240 Pyrimidine metabolism
    GJW-30_1_03443 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vgo03400]
    GJW-30_1_03443 (nrdJ)
Enzymes [BR:vgo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     GJW-30_1_03443 (nrdJ)
DNA repair and recombination proteins [BR:vgo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    GJW-30_1_03443 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Acetyltransf_11
Other DBs
NCBI-ProteinID: BAT60893
UniProt: A0A0S3PYB4
LinkDB
Position
3522419..3526147
AA seq 1242 aa
MRIERRYTKENQDAYAGIDFRLTVSEIKNPDGSVVFRCEDVEVPGFWSQVASDVLAQKYF
RKAGVPAALKKVEENTVPSWLWRSEPDQAALAMLPEKDRDVGEHSSKQVFDRLAGTWTYW
GWKGGYFDSEADARAFFDEMRYMFAMQMAAPNSPQWFNTGLHWAYGIDGPSQGHYYVDYQ
TGKLTKSKSAYEHPQPHACFIQSIADDLVNEGGIMDLWVREARLFKYGSGTGTNFSRLRA
ENERLAGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDVEAFVDWKVKE
EQKVAALVTGSKVNQRHLKAILKACVNCEGPGDDCFMPEKNPALKREIKLARSNQVPDNY
IKRVIQFARQGYTDIDFPIYDTDWDSEAYLTVSGQNSNNSVRVTDDFLKAVERDGNWDLL
WRNKKGIAKTLKARDLWESISHAAWASADPGLQYHTTVNDWHTCPASGEIRASNPCSEYM
FLDDTACNLASLNLLTFRDPKTKQFDIAGYEHAVRLWTIVLEVSVLMAQFPSKQIAQLSY
EYRTLGLGYANIGGLLMSSGIAYDSAEGRAICGALTAILTGVSYATSAEMAAILGPFPGY
KKNREHMLRVMRNHRRAAYGEASGYEKVGVAPVPLDHASCTNPALVERAKAAWDLALRLG
EEHGYRNAQSSVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSEADIAEIEAYAVGHGSLTNAPGINHSTLRQKGFNDEALAKVEKAIKSAFDIKFAF
NKWTLGEEYCVKTLGVDAADIAGSSFDLLTAIGFTKREIEAANIHVCGAMTIEGAPHLKA
EHYPVFDCANPCGRTGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLALKANALYRDGSKLSQPLNSQLISDDEDEEDAVEALVAQPQAARVAALAERVVEK
VIERVTVIREREKMPHRRKGYTQKAVVGGHKVYLRTGEYDDGRIGEIFIDMHKEGAALRS
FVNNFAIAVSLGLQYGVPLEEYVDAFTFTRFEPAGIVQGNDSIKNATSVLDYIFRELAVS
YLDRFDLAHVDPSQAAFDELGSGENEGKAPASHAARLVSKGLTRSRPPKFGVMEGGAGQG
GATVAALSALNTERPTGTTAYAGGGAQAALALEPAAKLSPAERLEALPFAKPDAKAQAAE
KRAEARARGYEGDSCSECGNFTLVRNGTCMKCDTCGSTTGCS
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgcggattgagcggcgctacacgaaagagaaccaagacgcctatgccgggatcgacttc
cggctgaccgtctccgaaatcaagaacccggacggttcggttgtgtttcgctgcgaggac
gtcgaggtccccggcttctggtcgcaggtcgcgtccgacgtgctcgctcagaagtatttc
cgcaaggccggcgtcccggcggccctgaagaaggtcgaggagaacaccgtcccgtcgtgg
ctgtggcgctcggagccggatcaggccgcgctcgcgatgctcccggagaaggaccgcgac
gtcggcgagcattcgtcgaagcaggtgttcgatcgtctggccggcacctggacttactgg
ggctggaagggcggctacttcgacagcgaggccgatgcgcgcgccttcttcgacgagatg
cgctacatgttcgccatgcagatggcggcgccgaattcgccgcagtggttcaacaccggt
ctgcactgggcctatggcatcgatggtccgagccagggccactattacgtcgactaccag
accggcaagctgacgaagtcgaagtcggcttacgagcacccgcagccgcacgcctgcttc
atccagtcgatcgccgacgacctcgtcaacgagggtggcatcatggacctgtgggtgcgt
gaggcgcgtctcttcaagtatggctccggcaccggcacgaacttctcgcgcctgcgtgcc
gagaacgagcgcctcgcgggcggcggtaagtcgtcgggcctgatgagcttcctcaagatc
ggcgatcgcgccgcgggcgccatcaagtcgggcggcacgacgcgccgcgcggccaagatg
gtcatcgtcgacgccgatcacccggacgtcgaggccttcgtcgattggaaggtcaaggaa
gagcagaaggtggcggctctcgtcaccggctcgaaggtcaaccagcgccacctcaaggcg
atcctcaaggcctgcgtgaattgcgaaggcccgggcgacgattgcttcatgccggaaaag
aacccagcactgaagcgcgagatcaagctcgctcgctccaaccaggtgccggacaactac
atcaagcgcgtcattcagttcgcgcgtcagggctacaccgacatcgacttcccgatctac
gacaccgactgggattcggaagcgtacctcacggtctcgggccagaactcgaacaactcg
gtgcgcgtcaccgacgactttttgaaagccgtcgagcgagacggcaattgggatctcctc
tggcgcaacaagaagggcatcgcgaagacgctgaaggcgcgcgatctgtgggagagcatc
tcccatgccgcatgggcgtcggccgatccgggcctgcagtatcacaccacggtcaacgat
tggcacacctgcccggcgtccggtgagatccgcgcatcgaacccgtgctccgaatacatg
ttcctcgacgacacggcctgcaatctcgcgtcgctgaacctgctcaccttccgcgacccg
aagaccaagcagttcgacatcgcgggctacgaacacgccgtccgtctctggaccatcgtg
cttgaagtctcggtgctgatggcgcagttcccgtcgaagcagatcgcgcagctctcctac
gagtaccgcacgctcggcctcggctacgccaacatcggcggcctcttgatgtcgtccggc
atcgcgtatgactcggccgaaggccgcgccatctgcggcgcgctgaccgcgatcctcacc
ggcgtctcgtatgcgacctcggccgaaatggccgcgatcctcgggccgttcccgggctac
aagaagaaccgcgagcacatgctgcgcgtcatgcgcaaccatcgccgcgccgcttacggc
gaagcttcgggctacgagaaagtcggcgtcgctccggtgccgctcgatcacgcctcgtgc
accaacccggcgctcgtcgagcgcgccaaggccgcgtgggacctcgcactgcgcctcggc
gaagagcacggctaccgcaacgcgcagtcgagcgtcgtcgcgccgaccggcacgatcggt
ctcgtgatggattgcgacaccaccggcatcgagcccgacttcgcgctcgtgaagttcaag
aagctcgccggcggcggttacttcaagatcatcaaccgcgcggtgccggaagcgctccgc
acgctcggttactcggaagccgacatcgccgagatcgaggcttacgccgtcggtcacggc
tcgctcaccaatgcgcctggcatcaaccactcgacgctgcgtcagaagggcttcaacgac
gaagcgctcgcgaaggtcgagaaggcgatcaagtccgccttcgacatcaagttcgcgttc
aacaagtggacgctcggcgaagagtattgcgtcaagacgctcggcgtcgacgctgccgat
atcgccggttcgtcgttcgatctccttaccgcgatcggcttcaccaagcgcgagatcgaa
gctgccaacatccacgtctgtggcgcgatgacgatcgaaggcgctccgcacctcaaggcc
gagcactatccggtgttcgactgcgccaatccgtgcggccggacaggcaagcgttatctc
tcggtcgagagccacatccgcatgatggcggccgcccagccgttcatctcgggcgcgatc
tccaagaccatcaacatgccgaacgaggcgacggtcgaggactgcaagaacgcctacatg
ctttcgtggaagctcgcgctcaaggcgaacgcgctctaccgcgacggctcgaagctctcg
cagccgctcaactcgcagctcatcagcgatgatgaggacgaagaggatgccgtcgaggct
ctcgtcgcgcagccgcaggcggcccgcgttgcggcgctcgccgagcgcgtcgtcgagaag
gtgatcgaacgcgtcacggtgatccgcgagcgcgagaagatgccgcatcgccgcaagggc
tacacgcagaaggccgtcgtcggtggccacaaggtgtatctccgcacgggcgaatacgat
gacggccgcatcggcgagatcttcatcgacatgcacaaggaaggcgcggcgctccgctcc
ttcgtcaacaacttcgccatcgcggtgtcgctcggcctgcaatacggcgtgccgctcgag
gaatacgtggacgccttcacgttcacgcgcttcgagccggccggcatcgtgcagggcaac
gactcgatcaagaatgcgacctctgtgctcgactacatcttccgcgagctcgccgtgtcg
tatctcgatcgcttcgatctcgcgcacgtcgatccctcgcaggccgcgttcgacgaactc
ggctccggcgagaacgaaggcaaggctccggcctcgcacgccgcgcgtctcgtctcgaag
ggcctcacccgctcgcgtccgccgaagttcggcgtgatggaaggcggcgccggccaaggc
ggcgcgaccgtcgcggcactctcggcgctcaacaccgagcgtccgaccggcacgaccgcg
tatgcgggcggcggcgcgcaagcggctctcgcgttggagccggccgcgaagctctcaccg
gccgagcgactcgaagccctgcccttcgccaagcccgatgccaaagcccaggccgccgag
aagcgcgccgaagcccgcgcccgcggctacgaaggcgacagctgcagcgagtgcggcaac
ttcacgctcgtgcgcaacggcacctgcatgaagtgcgacacgtgcggcagcacgacgggg
tgttcgtaa

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