Variibacter gotjawalensis: GJW-30_1_03811
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Entry
GJW-30_1_03811 CDS
T05320
Symbol
pbpF_3
Name
(GenBank) penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00550
Peptidoglycan biosynthesis
vgo01100
Metabolic pathways
vgo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJW-30_1_03811 (pbpF_3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJW-30_1_03811 (pbpF_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vgo01003
]
GJW-30_1_03811 (pbpF_3)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgo01011
]
GJW-30_1_03811 (pbpF_3)
Enzymes [BR:
vgo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GJW-30_1_03811 (pbpF_3)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GJW-30_1_03811 (pbpF_3)
Glycosyltransferases [BR:
vgo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GJW-30_1_03811 (pbpF_3)
Peptidoglycan biosynthesis and degradation proteins [BR:
vgo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GJW-30_1_03811 (pbpF_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAT61254
UniProt:
A0A0S3PZ92
LinkDB
All DBs
Position
3863896..3866100
Genome browser
AA seq
734 aa
AA seq
DB search
MNTPSWKEKIGRFFLDLDARVDSLVFQSGRGLGESYERFSIFMDRFHVAGFKRFLTEGFS
EAATLGTVGLLVLLTLAGPAFRETSDEDWLKKSELAVTFLDRYGNEVGSRGIRHNDSVPL
EEFPDHLIKAVLATEDRRFYEHFGIDIAGTARAFTANARAGGVVQGGSSITQQLAKNLFL
SNERTIERKVKEAFLALWLETRLTKNQILKLYLDRAYMGGGTFGVDAAAQYYFGKSAREV
SLAEAAMLAGLFKAPTRFAPHVNLPAARARASVVLDNLVEAGFMTEGQVFGARRGPATAV
DRRDERSPNYYLDWAFDEMKKLVDTFPKSIIERVFVVRTGLDVNLQREAENAVENSLRQY
GREYGARQAATVLMDIDGTVRAMVGGRDYGSSQFNRATDALRQPGSSFKPYVYAAAFEAG
MKPTQIVRDEPICLGNWCPQNYGRSFAGAVTLTQALVRSINTIPVRLSVMIGDTGSDIGR
AKSGRAKIIKLAQRMGLRTPLPDSSSLPIGAAEVTVLDHTAAYTAFPNGGKAAAAHAVLE
VRNGLGEVVWSFAKNGKRPEQVIKQQVASDINAILNKAVEEGTGKRSILDSGIKSAGKTG
TTNGYRDAWFVGYTGNYVCAVWFGNDDYSPTNRMTGGSLPAMTWKQIVGYAHQGVEAKQL
LGVTGSNPPVVAQAPAETDQPQSVRPAVLSRRAIDVLQRVERRIDEAMKTTANDAASMLP
SEKPALAASTGSRQ
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacaccgtcgtggaaagagaagatcgggcgatttttcctcgacctcgacgcgcgc
gtcgattctctcgtgttccaatccggccgcggcctcggcgagagctatgagcgcttctcg
attttcatggatcgcttccatgtcgcgggcttcaagcgcttcctcaccgaaggcttttcg
gaagccgcaacgttgggcaccgtcggcctcctcgtcctgctcacgctcgccggccccgcc
ttccgcgaaacgtccgacgaagactggctgaagaaatccgaactcgcggtcacattcctg
gatcgctacggcaacgaagtgggctcgcgcggaatacggcataacgattccgtgccgctc
gaagaatttcccgatcatctgatcaaggccgtgctcgcgaccgaggaccgccgcttctac
gaacatttcggcatcgacattgcgggcaccgcgcgcgccttcacggcgaatgcgcgcgcc
ggcggcgtcgtgcaaggcggctcgtctatcacacagcagcttgcaaaaaatctcttcctc
tccaacgagcgcacgatcgagcgcaaagtgaaggaagcattcctcgcgctgtggctcgag
acccgcctcaccaagaaccagattctcaaactctatctcgaccgcgcctacatgggcggc
ggcactttcggcgtcgatgccgccgcgcagtattacttcggtaagtccgcgcgcgaagtg
agtctcgccgaagccgcgatgctcgccggtctcttcaaagcgccgacgcgttttgcgcca
cacgtgaacttgccggcagcgcgcgcccgcgcctccgtcgtgctcgacaatctcgtcgaa
gccggcttcatgacggaaggccaagtcttcggcgcacgccgtggtcccgcaacggcagtc
gatcgccgcgacgaacgttccccgaattactatctcgactgggccttcgacgagatgaag
aagctcgtcgacactttcccgaaatcgatcatcgaacgcgtcttcgttgtccgcaccggc
ctcgacgtgaacctgcagcgtgaagccgaaaacgcggtcgagaactcgctgcgccaatac
ggccgcgaatacggcgcgcgccaagccgctaccgtgctgatggatatcgacggcacggtg
cgcgcgatggtcggcggccgtgattacggctcaagccagttcaaccgcgcgaccgacgcg
ctgcgtcagccgggatcgtcgtttaagccctacgtctacgcggctgcgttcgaagccggc
atgaagccgacgcagatcgtgcgcgacgaaccgatctgcctcggcaactggtgcccgcag
aactacggccgttcgttcgccggcgccgtcacgttgacgcaagcactggtgcgttcgatc
aacaccattccggttcgcctctccgtcatgatcggcgatacaggtagcgacatcggccgt
gcgaagtcgggccgcgcgaagatcatcaagctcgcgcagcgcatgggcctgcgcacgccg
cttccggattcctcatcgctaccgatcggcgccgccgaagtcaccgtgctcgatcacacc
gccgcctacacggccttcccgaacggcggcaaggccgccgccgcgcatgcggtgctcgaa
gtccgcaacggcctcggcgaagtcgtctggagctttgcgaaaaacggcaagcggcccgag
caagtgatcaagcagcaggtcgcgtccgacatcaacgcgatcctcaacaaagccgtcgaa
gaaggcaccggcaagcgctcgatcctcgacagcggcatcaagtcggccggcaagaccggc
acgaccaacggttatcgcgacgcctggtttgtcggctacacgggcaattacgtctgcgcc
gtctggttcggcaacgacgactacagcccgaccaaccgcatgaccggcggctcgctgccc
gcgatgacgtggaagcagatcgtcggctacgcgcatcagggtgtcgaggcaaagcaattg
ctcggagtcaccggctccaacccgccggtcgtcgcgcaagcgccggccgaaaccgatcag
ccacagtcggtccgcccggccgttctctcgcgccgcgcgatcgatgtcctgcagcgcgtc
gagcgccgcatcgacgaggccatgaagacgaccgccaacgacgccgcctccatgctgccg
tccgagaagccggcacttgccgcctcgaccggcagcaggcaatga
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