Variibacter gotjawalensis: GJW-30_1_03828
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Entry
GJW-30_1_03828 CDS
T05320
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vgo03000
]
GJW-30_1_03828 (gabR)
Transcription factors [BR:
vgo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
GJW-30_1_03828 (gabR)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
DUF6777
MarR_2
HTH_41
Motif
Other DBs
NCBI-ProteinID:
BAT61271
UniProt:
A0A0S3PZB9
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Position
complement(3880521..3881966)
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AA seq
481 aa
AA seq
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MQLVRKRSNSDPVNKTNQPDWSTLIPVLPGEGPRTRALYLAIRQLIEAGSVPAGAKLPTS
RDLATRLGMARGAVVAAFETLIADGFAEARVGAGTYVAASVPLLVVSTPRPGRETDVYRP
APGTLGPGALGVQTPDARTLKIFRGLVSRHLGKLGAQHFAYGDPRGGQALREAIATYLRS
ARGVRCTADDIIVTSGTQQGLDLFIRAILRAGETVWVEDPCYPMARAALNGNGLRVAGVP
IDAEGLDPERGEMIARDARAVYVTPSHQFPLGVAMTMRRRLALIDWAKRNDAWIIEDDYD
SEFRFAGSPLTALQGVDDAGRVVYLGTFSKVLFPGLRVGYLVVPQALRDDILALRSRTDR
YPATLLEGPLTDFIRDRHSAAHLRRARRQTLAARDALVAALKTNSRLDVQVPDQGLHLLA
RLPDGSDDVALVERAAAAGVGARALSRLYVDAEPSQGLVIGFSGYSADVMGDAGRKIASL
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggttcgaaaaaggtccaattctgatcctgtcaataagaccaatcagccagat
tggtcgacgctgatcccggttttgcccggcgaggggccgcggacgagggcgctttacctc
gcgatccgccaattgatcgaggcggggtcggtcccggccggcgccaagctgccgacatcg
cgcgaccttgcaacgcggctcggtatggcgcggggcgcggtggtcgcagccttcgagaca
ttgatcgccgacggatttgcggaggcgcgcgtcggtgccgggacttacgtcgcggcgagt
gtgccgctgcttgtggtctcgacgcctcggccgggccgggaaaccgacgtttatcggccg
gcgccggggacgctcggtcccggcgcgctcggcgttcagacgccggatgcgcggacgctg
aagatttttcgagggctcgtctcacgtcatctcggcaagctcggcgctcagcattttgcc
tacggcgatccgcgtggcgggcaagcgctgcgcgaggcgatcgcgacgtatctgcgcagc
gcgcgcggcgtgcgatgcacggccgacgacatcatcgtcacgtcgggcacgcagcagggg
ctcgatcttttcatccgcgcgatattgcgcgcgggcgaaaccgtgtgggtcgaagacccg
tgctatccgatggcacgcgcggcgctgaacgggaacggattgcgtgtcgccggcgtgccg
atcgatgccgaggggcttgatccggagcgtggcgaaatgatcgcgcgagacgcgcgcgcc
gtctacgtgacgccgtcgcatcagtttccgcttggtgtcgcgatgacgatgcggcggcgt
ctcgcgctgatcgactgggcgaagcgcaacgacgcgtggatcatcgaagacgattacgat
agcgagtttcgcttcgcggggtcgccgctgacggcgctgcagggcgtcgacgatgcgggg
cgcgtggtttatctcgggacgttctcgaaagttctgtttccgggcttgcgcgttggatat
ctcgttgtgccgcaagcactacgcgacgatatcctcgcgctgcgcagccgcacagaccgc
tatccggcgacgctgctggaaggcccgctcaccgacttcattcgcgaccgacattccgcg
gcgcatctgcggcgcgcgcggcggcagacgctggcggcgcgcgatgcgctggtcgcggcg
ctgaagaccaactcgcgacttgatgtgcaagtgccggaccaaggtttgcatctgctcgcg
cggttgccggacggcagcgacgacgtcgcgctggtcgaacgtgcggcggcggctggcgtc
ggtgcgcgagcgttgtcgcgtctttacgtcgatgcggagccgagccaaggattggtgatc
ggcttctcgggatattctgccgacgtgatgggtgatgccggacggaagatcgcttcactc
gcgtga
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