Variibacter gotjawalensis: GJW-30_1_03985
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Entry
GJW-30_1_03985 CDS
T05320
Symbol
bfrD_3
Name
(GenBank) putative TonB-dependent receptor BfrD precursor
KO
K16090
catecholate siderophore receptor
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vgo02000
]
GJW-30_1_03985 (bfrD_3)
Transporters [BR:
vgo02000
]
Other transporters
Pores ion channels [TC:
1
]
GJW-30_1_03985 (bfrD_3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
FlgH
Motif
Other DBs
NCBI-ProteinID:
BAT61428
UniProt:
A0A0S3PZS8
LinkDB
All DBs
Position
complement(4055516..4058041)
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AA seq
841 aa
AA seq
DB search
MTQSSEHFASQKYAGPGGDIPSWLNEACAPRTLGTAAVGIASIMFGADAAQAQQQQAQNQ
SGASSLPTVQVQAPRVRRATPQPRPVRRAAQPRRAPAPVAASAPVQPQGGTFGTPSSSPN
TLTAGTGLARMPRTIQETPQTVNVVSEQTIREQQITTIDQALRNVPGVTSAAGEGGGGLN
GDQFRIRGFDAKGDVYVDGLRDFGVYVRDAFNVEQIQVFKGPSSEGFGMGTTGGAINIQS
KQAKLGNVYEVGGVLGQGFWGRGTFDVNQQLSATQALRVTGMINSQDVVGRNHVFSDRAG
AAISYGTGLGTNTSWHLNYFYQHNDRMPESGVPMVSRGNGTDFVPSKANPARPVTELGLP
RDIFYGKDTDKDISDAHMLTSKLKHEIAPWLTITNDSRLSYFERSFSTTIPGCNGAVTAS
GTANPGGNGAATCAGQFFAGSNAPLVANGGGNPTYDDKSLAIQNLTTLNGKFNVAGFRHE
AVLGLDVFYAQNDRQLYSVVGTKANQPIRTPIFASNGAYSFVPNPNNTRSASGTDVGVFV
GDRMWLTEQFSILAGVRWDHLSIDSFQRTQAGTPVVNTVTSLSQSTSFTTPRISLIYEPW
KNQIFYANYAESATPAGQLITNSSQNVLNAATPNLEPEKNKTYEVGYKLSLFDNKLGFTT
ALFQVEKNNARFTDPTTGDSLATGETQRVRGVELGLTGQLTKDWNVLFAYSYMDGRVTAQ
TAAVTAAAPSVVGNRIQGVAFNNASLWTTYNLSSLIDTGRGKLTYGAGIFYRGEVYTSSA
NNALVPQSFSLDMMLAYEWDKYRVAINAYNLTDNVNYDTFQATRAIPGAGRTVMITGAAR
W
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatcgagcgagcacttcgcatcgcagaagtatgcgggaccgggcggagacatt
ccgtcatggctgaatgaggcatgcgcaccgcgcacgctcggcacggccgcagtcggcatc
gcgtcgatcatgttcggcgcggatgccgcgcaggcgcaacagcagcaggctcagaaccaa
tccggcgcaagctcgctgccgaccgtgcaggtgcaggcgccgcgcgttcgccgcgcaacg
ccgcagccgcgtccggtgcgccgggctgcgcagccgcgccgagctccggcgccggttgcc
gcatccgctccggtgcagccgcaaggcggcacgttcggtacgccttcgtcgtcgccgaac
acgctgacggcaggcaccggcctcgcgcgcatgccgcgcaccattcaggaaacgccgcag
accgtgaacgtcgtctccgagcagacgattcgcgagcagcagatcacgacaatcgatcaa
gcgctgcgcaacgtgccgggtgtcaccagcgcggccggtgagggcggcggtggcctcaac
ggcgaccagttccgcatccgcggtttcgacgcaaaaggcgacgtctatgtcgacggtctg
cgcgatttcggcgtctacgttcgcgatgcgttcaacgtcgagcagattcaggtgttcaag
ggcccgtcgtcggaaggcttcggcatgggcaccacgggcggtgcgatcaatattcagagc
aagcaggcgaagctcggcaacgtttacgaagtcggcggcgttcttggccaaggtttctgg
gggcgcggcacgttcgacgtcaaccagcagctcagcgcgacgcaggctttgcgcgtcacc
ggcatgatcaacagtcaggatgtcgtcggccgcaatcacgtgttctcggatcgcgccggc
gctgcgatttcgtacggtacgggcctcggcaccaacacgagttggcacctcaactatttc
tatcagcacaacgaccgcatgccggaatcaggcgtgccgatggtgtcgcgcggcaacggc
acggacttcgtgccgagcaaggcgaacccggcgcgtcccgtcaccgaactcggtctgccg
cgtgacattttctacggcaaggacaccgacaaagacatcagcgatgcgcacatgctgacg
tcgaagctgaagcacgagatcgctccgtggctcacgatcacgaacgactcgcgcctttcc
tacttcgagcgcagcttctcgacgacgatcccgggctgtaacggcgctgtcacggcgagc
ggaacggcgaacccaggcggcaacggcgcggcgacgtgcgctgggcagttcttcgccggc
agcaatgcgccgctcgtcgccaacggcggcggcaatccaacctacgacgacaagtcgctc
gcgatccagaacctgaccacgttgaacggtaagttcaatgtcgccgggttccgtcacgaa
gcagttctcggcctcgacgtcttctacgcgcagaacgatcgccagctctattctgtcgtc
ggcacgaaggcgaaccagccgatccgtacaccgatcttcgcgagcaatggcgcttactcg
ttcgtgccgaacccgaacaacacgcgttcggcttccggcaccgacgtcggcgtgttcgtc
ggcgaccgcatgtggctgaccgagcagttctcgatcctcgccggcgttcgctgggatcat
ctctcgatcgatagcttccagcgcacacaagccggcacgccggtcgtgaacaccgtgacg
agcctgtcgcagtcgacgagcttcacgacaccgcgtatcagcctgatctacgaaccctgg
aagaaccagatcttctacgcgaactacgcggagtcggcgacgccggccggtcagctgatc
accaactcgtcgcagaacgttctcaacgctgcgacaccgaacctcgagccggaaaagaac
aagacctacgaggtcggctacaagctcagcctgttcgacaataagctcggcttcacgacc
gcgctcttccaagtcgagaagaacaacgcacgcttcaccgatccgacgacgggcgactcg
ctcgcaaccggtgaaacgcagcgcgtgcgcggcgtcgagctcggcctgacgggtcaactc
accaaggactggaacgtcctgttcgcctactcgtacatggatggccgcgtcaccgcgcaa
accgcagccgtgacagcagcggctccgtcggtcgtcggcaaccgcatccagggcgttgcc
ttcaacaacgcctcgctgtggacgacgtataacctgtcgtcgctgatcgacacgggccgc
ggcaagctgacatacggcgcgggtatcttctatcgcggtgaagtctacacatcgagcgcc
aacaacgcgttggtgccgcagtcgttctcgctcgacatgatgcttgcctacgagtgggac
aagtaccgcgtcgcgatcaacgcctacaacctcacggacaatgtgaactacgacacgttc
caggcaacgcgcgcgatcccgggtgcgggccgcaccgtgatgatcacaggcgcggctcgc
tggtaa
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