Variibacter gotjawalensis: GJW-30_1_04003
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Entry
GJW-30_1_04003 CDS
T05320
Symbol
lasR
Name
(GenBank) transcriptional activator protein LasR
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJW-30_1_04003 (lasR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vgo03000
]
GJW-30_1_04003 (lasR)
Transcription factors [BR:
vgo03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
GJW-30_1_04003 (lasR)
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAT61446
UniProt:
A0A0S3PZS1
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Position
4074087..4074863
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AA seq
258 aa
AA seq
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MERSVRPRRTGRDRSMELRDGLGYHVFDFCNQLAGLVTPAEIVDLFHKEIAKIRFDFSIV
TGVPADNQRFEQMVLLQRLPAGWFETYTRGNFASADPVLRRCRTSTSMFNWTEAGYDPHA
EPKARKVMQQAIDFGLASGFSLPIHRADGNRFCFSISGARIEMSERFRPALHLMMMYTCE
HLLRLSDKPPDSANPLTQREREVLRWSGSGKSASETAELMKITERTVNAHAGAAITKLGA
NNRTQAVVRAMQFRFIDL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcagcgttcgtcccaggaggacgggaagggaccggtctatggaattgcgagac
gggcttggctaccacgtgttcgatttttgcaatcagttagctggtctggtgaccccggcc
gaaatcgtcgatctgttccacaaagagattgcaaagatcaggttcgacttttccatcgtg
acaggcgtcccagccgacaatcaacgcttcgaacaaatggtgttgctccaacgattgccc
gccggatggtttgagacatatacgcgcggaaactttgcgagcgcggatccagtactacga
cgctgtcgaacatctacatcgatgtttaattggactgaagcaggttacgatcctcacgca
gaaccgaaagcacgaaaggtgatgcagcaagccatcgactttggcctagcatccggcttc
tcactgcctatccatcgcgcagatggaaatcggttttgcttctcaatctctggagcaagg
atcgaaatgtccgaacgcttccgccctgcccttcatctaatgatgatgtacacctgcgaa
catcttctccggttatccgacaagccacccgacagtgccaatccattgacgcaaagggaa
cgtgaagtgttgcgttggtcaggcagcggaaagtccgcttctgaaaccgcagaactcatg
aagatcaccgagcggactgtgaacgcgcatgccggggcggccataacaaaactcggcgcg
aacaataggacgcaagccgttgtgcgtgcgatgcagttccgattcatcgacctctga
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