Variibacter gotjawalensis: GJW-30_1_04054
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Entry
GJW-30_1_04054 CDS
T05320
Symbol
lcfB_5
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00061
Fatty acid biosynthesis
vgo00071
Fatty acid degradation
vgo01100
Metabolic pathways
vgo01212
Fatty acid metabolism
vgo02024
Quorum sensing
vgo04146
Peroxisome
Module
vgo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GJW-30_1_04054 (lcfB_5)
00071 Fatty acid degradation
GJW-30_1_04054 (lcfB_5)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GJW-30_1_04054 (lcfB_5)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJW-30_1_04054 (lcfB_5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vgo01004
]
GJW-30_1_04054 (lcfB_5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgo04147
]
GJW-30_1_04054 (lcfB_5)
Enzymes [BR:
vgo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GJW-30_1_04054 (lcfB_5)
Lipid biosynthesis proteins [BR:
vgo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GJW-30_1_04054 (lcfB_5)
Exosome [BR:
vgo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GJW-30_1_04054 (lcfB_5)
Exosomal proteins of breast cancer cells
GJW-30_1_04054 (lcfB_5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAT61497
UniProt:
A0A0S3PZV6
LinkDB
All DBs
Position
complement(4129531..4131069)
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AA seq
512 aa
AA seq
DB search
MLQTDFIASVPTLLKRQAKLRGDKVAYTDAGGAITYAALDQTTARLAGHLQAQGAAVGSA
VAVFLPNSIAWIQTCFATLRAGAVSVPISYEATEPEVAYRIEDSDCRIVVTTDERAELVR
RAAGARPLILILVDRGAKQDGVRLADLLTQEAEAPRDPERMHEASFIVYTSGTTGRAKGV
LLSLHSMLWITAACWGPIYGITANDVILSPLPLFHSYALNLSVLSVLAIGASEHLMEKFS
TKDALRLLGEGRFTFMPGVPTMFHYLVQAAEPGQKLPGLRLCVSAGAIMPATLNREFEDR
FGVRLLDGYGITETATMVTSNWPKGGRVLGSCGFPVPGLAVRIVDPATRRDVDAGAEGEL
IVRGPNLMLGYHNKPAETAAALRDGWYHTGDLARADENGFLTITGRLKELIIRGGQNIAP
AEIEEVASQFDGVADCAVIGIPHQSLGEVPIIFVAKKDGDDLKADDLLAHCRKHLSAYKV
PEAVHFVADIPRTGSGKIMRFKLRDRLSQSNR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaccgacttcatcgcttcagttccgacgctgctaaaacggcaggccaaattg
cgtggcgacaaggtggcgtatacggacgccggtggcgcgataacttacgcagcgctcgat
cagacgacggcgcgcctcgcgggtcatctccaggcgcaaggcgcggctgtcggcagtgcg
gtcgcggtgtttctgccgaactcgattgcatggatacagacgtgtttcgcgacgctgcgc
gcaggcgcagtcagcgtgccgatctcgtatgaggcgacggagcccgaagtcgcttaccgg
atcgaagacagcgattgccgcatcgtcgtgacgacggatgagcgtgccgagttggtgcgc
cgcgctgccggtgcgcgaccgttgatattgatcctggtcgatcgcggagcgaagcaagat
ggtgtccgtctcgcagatcttctgacgcaggaggctgaagcacctcgcgatcccgagcgc
atgcacgaggcatcgttcatcgtctacacgtccggtaccaccggccgcgcgaagggcgtg
ctgctgtcgttgcactcaatgctctggatcacagccgcatgctgggggccgatctacgga
atcactgcaaacgatgtcatcctttcacctttgccgcttttccactcctacgcgctcaac
ctctcggtgctgagcgtccttgcgatcggcgcgagcgaacacctaatggagaagttctcg
accaaggacgcgttgcgcttgctcggtgaaggacgttttacgttcatgcccggtgtgccg
acgatgtttcactatctcgtgcaggcggcagaaccgggccagaaacttccaggattgcga
ttgtgcgtgtcggccggcgcaatcatgcccgcaacgctcaatcgcgagtttgaagatcgc
ttcggtgttcgcttacttgacggatacggcatcaccgaaaccgcgacgatggtcacgtcg
aattggccgaagggaggccgcgtgctcggctcgtgcggttttccggtgcctgggctcgcg
gtgcgtattgtcgatccggcaacgcgtcgcgatgtcgatgctggtgccgaaggtgagctg
atcgtacgcgggccgaatctgatgctcggctatcacaacaaaccggccgaaacggctgcg
gcgctgcgtgacggctggtatcacacgggcgatcttgcccgcgccgacgagaatggcttt
ctcaccatcacggggcggctgaaagaactcatcatccgcggtggccaaaacatcgcgccg
gccgagatcgaagaagtcgcgagccagttcgacggcgtcgccgattgcgcggtgatcggc
atcccgcatcaatctctcggcgaagtgccgatcatcttcgtcgcgaagaaggacggtgat
gacctgaaggcggacgatttgctggcgcattgccgcaagcatctctcggcttacaaggtg
ccggaagccgtgcacttcgttgccgatatcccccgcacggggtccggcaagatcatgcgg
ttcaagttgcgggacaggttgagccagtcgaaccgttag
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