Variibacter gotjawalensis: GJW-30_1_04200
Help
Entry
GJW-30_1_04200 CDS
T05320
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vgo03021
]
GJW-30_1_04200 (rpoH)
Transcription machinery [BR:
vgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJW-30_1_04200 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_11
Sigma70_r3
HTH_3
KORA
GntR
HTH_28
HTH_15
UCR_14kD
DprA_WH
PgaD
Motif
Other DBs
NCBI-ProteinID:
BAT61640
UniProt:
A0A0S3Q0E5
LinkDB
All DBs
Position
4272740..4273639
Genome browser
AA seq
299 aa
AA seq
DB search
MARAASLPIPAGEAGLSRYLDEIRRFPMLEPQQEYMFAKSWREHGDREAAHKLVTSHLRL
VAKLAMGYRGYGLPISEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALEEGDLRPDQVQIIAKRLGVTEQDVVDMNRRL
GGDVSLNAPLREDGDSGEWQDWLVDDSASQESRMVASEEADNRRKALGQALDVLNERERR
IFEARRLADDPVTLEELAAEFGVSRERVRQIEVRAFEKVQKAVKNRLAEIESPAMAPAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgctgctagtctaccaattcctgcaggcgaggcaggcttatctcgctatctg
gacgaaatccgccggttcccgatgctggagccgcagcaggaatacatgtttgccaagagc
tggcgcgaacacggcgatcgtgaagccgcgcataagctcgtcaccagccatctgcgtctc
gtcgcgaagctcgcgatgggctatcgcggctatggtctcccgatctcggaagtgatctcc
gaaggcaacgtcggcctgatgcaggccgtcaagcgcttcgagccagagaaaggcttccgc
ctggcgacctacgccatgtggtggatcaaggcgtcgatccaagaatacatcctgcgctcg
tggtcgctcgtgaaaatgggcacgaccgcgaaccagaagaagctgttcttcaacctgcgt
aaggcgaagagcaaaatctccgcgctcgaggaaggcgatcttcgccccgatcaagtgcag
atcattgccaagcgtctcggcgtcaccgagcaggacgttgtcgacatgaaccgccgcctc
ggtggcgacgtgtcgctcaatgcgccgctgcgtgaagacggtgactcgggcgagtggcag
gattggctggtcgacgatagcgctagccaagagtcgcgcatggtcgcgagcgaagaagcc
gacaatcgccgcaaggcgctcggccaggcgctcgatgttctcaacgaacgcgagcgccgc
atcttcgaagcgcgccgccttgccgacgatccggtcacgctcgaagagcttgccgccgaa
ttcggcgtctcgcgcgagcgcgtgcgtcagattgaggtgcgtgcgttcgagaaggtgcag
aaggcggtgaagaaccgtcttgccgaaatcgaaagccccgcaatggcgccggccgcctaa
DBGET
integrated database retrieval system
