Variibacter gotjawalensis: GJW-30_1_04387
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Entry
GJW-30_1_04387 CDS
T05320
Name
(GenBank) deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_04387
Enzymes [BR:
vgo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
GJW-30_1_04387
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
GJW-30_1_04387
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Emfourin
Motif
Other DBs
NCBI-ProteinID:
BAT61825
UniProt:
A0A0S3Q0Z0
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Position
4473313..4474896
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AA seq
527 aa
AA seq
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MRSLVFILGDQLSRDISSLDGFDARHDVVLMVEVADETTYVKHHKQKIALILSAMRHFAE
ELTRSGIAVEYVRLNDPNNTGSFSGELARATSRFKPHQIIVTEPGEWRVRRMMDDWSVDF
DVPVEIRDDDRFMCSRAEFRRWAGDRKNYRMEFFYREMRRQSGLLMDDATPCGDRWNYDS
ENRKRLPSSERLPKRSTVEPDAITTDVLKLVAECFGDHFGDLETFGWAVTREDALCALDQ
FVADYLPKFGSYQDAMARDEPFVFHAVLSPYLNIGLLKPKEVCLAAERAFRAGHIPLNAA
EGFIRQVLGWREFVRGVYWLEMPGYAETNALSATRPLPWFYWSGDTDMSCLSITIADTRR
NAYAHHIQRLMVTGNFALLTGIRPSEIEEWYLIVYADAFDWVELPNTHGMVMFADGGMLA
SKPYAASGAYIDRMSDYCRGCRYNPKIKLGEGACPFNLLYWRFIAMNRAVLQHNPRMRIV
YKNLDQMSGQRLQQLFREADEFLNQLDQPTPQREQQDLFSYNRQQIE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatcgttagtgtttatcctcggtgatcagctcagtcgagatatttcgtcgctagac
ggttttgacgctcgacatgacgtcgtgttgatggtcgaggtggcggacgaaacgacctac
gtcaaacatcacaagcagaagattgcgttgattttgtccgcgatgcggcattttgccgag
gagctgacaagatccgggattgccgtagagtatgtgcgtctgaacgacccaaacaacact
ggatcgttcagcggcgagttagcacgcgcaacgtcgcgttttaagcctcatcagatcatc
gtcacggagcccggtgaatggcgggtccgacgcatgatggatgactggtccgtagatttt
gatgttccagtagaaatccgcgacgacgatcgtttcatgtgttcgcgcgctgagtttagg
cgctgggcgggcgaccgcaaaaactatcgcatggaatttttctaccgagagatgcgtcgt
cagtcgggtcttttaatggatgacgcgacgccatgcggggaccgctggaattacgattcc
gagaaccggaaacgtctgccttcttcagaacgactgcctaagcgttcaacggttgagccg
gatgctataactacggatgtgttgaagctggttgctgaatgttttggcgaccacttcggc
gatcttgaaacgtttggttgggcagtgacgcgggaagacgctctttgcgctcttgaccaa
ttcgtcgcagattacttgccaaaattcggcagctaccaagacgcgatggctcgtgatgag
ccgttcgtttttcacgccgtgctttctccttacctaaacattggccttcttaagcctaaa
gaagtctgcttggcagccgaacgagcattccgcgcaggacacattccattaaacgctgcg
gagggcttcatccggcaagttcttgggtggcgcgagtttgtccgcggagtctattggctt
gagatgccgggttacgccgaaaccaacgcgctgtctgctacgagaccgcttccgtggttc
tactggtccggcgatacggacatgagttgtttgtccatcacgatcgctgacacgcgaagg
aatgcttacgcccatcacattcaacgattgatggtgacgggaaatttcgcccttctaact
ggcataagaccctccgagatcgaagaatggtatctcatcgtttatgcagacgcgttcgat
tgggttgaactgccaaacacgcatgggatggtgatgtttgccgacggtggcatgctggca
tcgaagccatatgcggcatctggcgcttacatcgaccggatgtctgattactgtcgtgga
tgccgctacaatccaaaaataaagttgggcgaaggcgcgtgtccgttcaacctgctctac
tggcgctttatcgcgatgaatcgagccgttctacagcacaatccgcgtatgcgcatcgtg
tataaaaatctcgatcaaatgtccggccaaagattgcagcaactttttcgtgaagccgac
gaatttctgaatcagttagaccagccaacgccgcagcgagaacaacaagatctcttcagc
tacaatcgccaacaaatcgagtaa
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