Vallitalea guaymasensis: HYG85_01380
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Entry
HYG85_01380 CDS
T07172
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYG85_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vgu03019
]
HYG85_01380
03009 Ribosome biogenesis [BR:
vgu03009
]
HYG85_01380
Enzymes [BR:
vgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYG85_01380
Messenger RNA biogenesis [BR:
vgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYG85_01380
Ribosome biogenesis [BR:
vgu03009
]
Prokaryotic type
rRNA helicases
HYG85_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUH27635
UniProt:
A0A8J8M7K8
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All DBs
Position
312099..313751
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AA seq
550 aa
AA seq
DB search
MNFNELNISDNILKAISDMGFEEATEIQEKSIPEILSGSDIIGQSQTGTGKTAAFAIPIL
EKVDPSIKKPQVLVLCPTRELAVQVCNEFKKLTRYMHNVKSFPVYGGEPIYRQISVLKKG
VQIIIGTPGRLMDHMNRKTIKLDHVNSIILDEADEMLNMGFREDIETILSKIPNENLQTI
LFSATMPKSILDITHNYQKKPKLIKITRKELTTDTIDQRYYHVLEHHKLEVLRRLIDVYH
PKLSLIFCNTKKKVDEVTDLLQDNGYACDKIHGDMNQVVRLSVLNKFNKGIINILVATDV
AARGLDIQNVEAVVNYDVPDNEEYYVHRIGRTGRAGKKGTSYTLVSKTETRRISNIIRYI
KKDIPRKKIPSINKVNAVKIDNYMESLASTIDNTSDLEQYENIINKLNDKGYTSDKIAAA
LLMSNLELKEENNMNLSYEISRRQPYNNDRNDRGNNKSKRYGNKREKGMSRLYVNIGKNH
KIGVRDIVGAIAGETKIKGSSIGSIDMYDKYTFVEIPEKYANQVIDKMNQSRIRGKNITM
ELANTRKRRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaacgaattaaatatatctgataatattttaaaagctatatctgatatggga
tttgaagaagcaactgaaatacaagaaaaatcaattccagaaatattatcaggcagtgat
attattggacaatcccaaacaggtacaggtaaaacggcagcatttgcaattccaatatta
gaaaaagtggatccatctattaaaaagccacaagtattagtcctatgccctacaagagag
ttagctgttcaagtatgtaatgagttcaagaagctaacaagatacatgcataatgtaaaa
tcatttcctgtttatggtggcgaacctatctatagacagatttctgttctaaaaaaaggt
gttcaaataatcattggtactcctggaagacttatggatcatatgaatagaaaaaccatc
aaacttgaccatgttaattcaattatactggatgaagctgatgaaatgcttaatatggga
ttcagagaagatattgagaccatactaagtaaaatacctaacgaaaatcttcaaactata
cttttttcagcaactatgccaaaaagtatcttagatattactcataattaccaaaagaag
cctaagcttattaagattacaagaaaagaattgacaactgatactatcgatcaaagatat
tatcatgttcttgaacatcataaattagaagttctaagacgattgatagatgtgtaccat
ccaaaactatcattaatattctgtaataccaaaaagaaggttgatgaggtaacagactta
ttacaagacaatggttacgcatgtgataaaatacatggagacatgaatcaagtagtaaga
cttagcgtactaaacaaattcaataaaggtattattaatatacttgttgctactgacgtt
gctgcaagaggccttgatattcaaaatgttgaagcggttgttaattatgacgtgccagat
aatgaagaatattatgtccatagaattggtcgtacaggtagagcaggtaaaaaaggtact
tcttatactttggtttctaaaacagaaactaggagaatatcgaatataattagatatatt
aaaaaagatatacctagaaaaaaaattccatcaatcaacaaagttaatgctgttaagata
gataactatatggaatcactagcttctactattgacaatacttctgatttggaacaatac
gaaaacatcataaacaaacttaacgataaaggttatacttctgataagatagccgcagca
ctacttatgtctaatcttgaattaaaagaagaaaataacatgaatctgtcttatgaaatc
agtagaagacaaccatacaataatgatagaaatgacagaggaaataacaaatccaaacgc
tatggcaataaaagagaaaaaggtatgtcaagattatatgtcaatattggaaagaaccat
aaaataggtgttagagatatagttggtgccatcgcaggcgaaactaagataaaaggttcc
tccattggttcaattgatatgtatgataaatatacttttgtggaaataccagaaaaatac
gctaatcaagttattgataaaatgaatcaatcaagaatccgtggtaaaaatattacaatg
gaattagccaacacaagaaaaagaagaagataa
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